miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38781_cte-mir-750:mirbase
          Length = 99

 Score = 46.1 bits (23), Expect = 5e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 61 cagatctaactcttccagctcat 83
          |||||||||||||||||||||||
Sbjct: 60 cagatctaactcttccagctcat 82

>34989_isc-mir-750:mirbase
          Length = 101

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 61 cagatctaactcttccagctca 82
          ||||||||||||||||||||||
Sbjct: 62 cagatctaactcttccagctca 83

>35397_ame-mir-750:mirbase
          Length = 136

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 61  cagatctaactcttccagctca 82
           ||||||||||||||||||||||
Sbjct: 85  cagatctaactcttccagctca 106

>39138_sme-mir-750:mirbase
          Length = 105

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 gtcagatctaactcttccag 78
          ||||||||||||||||||||
Sbjct: 66 gtcagatctaactcttccag 85

>39137_sme-mir-750:mirbase
          Length = 105

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 gtcagatctaactcttccag 78
          ||||||||||||||||||||
Sbjct: 66 gtcagatctaactcttccag 85