miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>38967_sja-mir-7:mirbase
          Length = 147

 Score =  291 bits (147), Expect = 7e-80
 Identities = 147/147 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttgccgttgcttaatcatggaagactggtgatatgttgttgattgatgaaagtttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atgttgccgttgcttaatcatggaagactggtgatatgttgttgattgatgaaagtttta 60

                                                                       
Query: 61  agtatttcataatttaaagcttcatcaaaacaatgatattacgaacaacttatcgcattc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agtatttcataatttaaagcttcatcaaaacaatgatattacgaacaacttatcgcattc 120

                                      
Query: 121 ttccatgtatgcaataggttgaacttc 147
           |||||||||||||||||||||||||||
Sbjct: 121 ttccatgtatgcaataggttgaacttc 147




>38936_emu-mir-7:mirbase
          Length = 81

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tggaagactggtgatatgttgt 42
          ||||||||||||||||||||||
Sbjct: 12 tggaagactggtgatatgttgt 33




>38913_egr-mir-7:mirbase
          Length = 81

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 21 tggaagactggtgatatgttgt 42
          ||||||||||||||||||||||
Sbjct: 12 tggaagactggtgatatgttgt 33