miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38861_lgi-mir-79:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatgattg 46
|||||||||| ||||||||||||||||
Sbjct: 21 gtctttggttatctagctgtatgattg 47
>38852_lgi-mir-9:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatgattg 46
|||||||||| ||||||||||||||||
Sbjct: 20 gtctttggttatctagctgtatgattg 46
>31421_oan-mir-9-1:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 18 tggtctttggttttctagctgtatgattgta 48
|||||||||||| ||||||||||||| ||||
Sbjct: 27 tggtctttggttatctagctgtatgagtgta 57
>25690_xtr-mir-9-3:mirbase
Length = 76
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgtaaa 50
||||||||| ||||||||||||| ||||||
Sbjct: 8 tctttggttatctagctgtatgagtgtaaa 37
>38743_cte-mir-79:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgatt 45
||||||||| |||||||||||||||
Sbjct: 23 tctttggttatctagctgtatgatt 47
>38729_cte-mir-9:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgatt 45
||||||||| |||||||||||||||
Sbjct: 21 tctttggttatctagctgtatgatt 45
>38597_ppc-mir-9:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgatt 45
||||||||| |||||||||||||||
Sbjct: 29 tctttggttatctagctgtatgatt 53
>34539_fru-mir-9-3:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatgattgtaaaat 52
|||||||||| ||||||||||||| ||| ||||
Sbjct: 15 gtctttggttatctagctgtatgagtgttaaat 47
>34687_tni-mir-9-3:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatgattgtaaaat 52
|||||||||| ||||||||||||| ||| ||||
Sbjct: 15 gtctttggttatctagctgtatgagtgttaaat 47
>24646_bfl-mir-9-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 6 gtctttggttatctagctgtatga 29
>24647_bfl-mir-9-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 6 gtctttggttatctagctgtatga 29
>24648_bfl-mir-9-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 5 gtctttggttatctagctgtatga 28
>24649_bfl-mir-9-2:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 5 gtctttggttatctagctgtatga 28
>25422_pma-mir-9a-1:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 14 gtctttggttatctagctgtatga 37
>25424_pma-mir-9b:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 75 gtctttggttatctagctgtatga 52
>25692_xtr-mir-9a-2:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 15 tctttggttatctagctgtatgagtgta 42
>25887_gga-mir-9-1:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>26394_tgu-mir-9-1:mirbase
Length = 73
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 10 gtctttggttatctagctgtatga 33
>26619_cfa-mir-9-2:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 1 tctttggttatctagctgtatgagtgta 28
>26942_eca-mir-9a-2:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 10 tctttggttatctagctgtatgagtgta 37
>27330_mdo-mir-9-2:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>27476_age-mir-9:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>27538_lla-mir-9:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>27646_mml-mir-9-2:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>28168_mne-mir-9:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>28255_ggo-mir-9:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>28356_hsa-mir-9-2:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>30143_ptr-mir-9-2:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>30747_ppy-mir-9-2:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>31422_oan-mir-9-2:mirbase
Length = 68
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 8 tctttggttatctagctgtatgagtgta 35
>31771_mmu-mir-9-2:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 8 tctttggttatctagctgtatgagtgta 35
>32653_rno-mir-9-2:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>33104_rno-mir-3597-2:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 90 tctttggttatctagctgtatgagtgta 63
>33105_rno-mir-3597-2:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 90 tctttggttatctagctgtatgagtgta 63
>33125_bta-mir-9-2:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>33908_ssc-mir-9-2:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 16 tctttggttatctagctgtatgagtgta 43
>34865_sko-mir-9:mirbase
Length = 79
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 12 tctttggttatctagctgtatgagtgta 39
>34872_sko-mir-79:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 24 tctttggttatctagctgtatgagtgta 51
>35275_aga-mir-9a:mirbase
Length = 81
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tctttggttttctagctgtatgattgta 48
||||||||| ||||||||||||| ||||
Sbjct: 11 tctttggttatctagctgtatgagtgta 38
>36088_dan-mir-9a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
>36166_der-mir-9a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
>36254_dgr-mir-9a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 8 gtctttggttatctagctgtatga 31
>36347_dme-mir-9a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
>36348_dme-mir-9a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
>36764_dmo-mir-9a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 8 gtctttggttatctagctgtatga 31
>36837_dpe-mir-9a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
>36913_dps-mir-9a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
>37126_dse-mir-9a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
>37204_dsi-mir-9a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
>37340_dvi-mir-9a:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 8 gtctttggttatctagctgtatga 31
>37415_dwi-mir-9a:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
>37494_dya-mir-9a-1:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
>37495_dya-mir-9a-2:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gtctttggttttctagctgtatga 43
|||||||||| |||||||||||||
Sbjct: 9 gtctttggttatctagctgtatga 32
