miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39087_sme-mir-71a-2:mirbase
          Length = 78

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 17 tgaaagacacgggtagtgagata 39
          |||||||||||||||||||||||
Sbjct: 12 tgaaagacacgggtagtgagata 34

>38742_cte-mir-71:mirbase
          Length = 101

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 16 atgaaagacacgggtagtgagat 38
          |||||||||| ||||||||||||
Sbjct: 21 atgaaagacatgggtagtgagat 43

>34871_sko-mir-71:mirbase
          Length = 101

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 17 tgaaagacacgggtagtgagata 39
          |||||||||| ||||||||||||
Sbjct: 22 tgaaagacacaggtagtgagata 44