miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39086_sme-mir-71a-1:mirbase
          Length = 84

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                 
Query: 12 tgaaagacacgggtagtgagata 34
          |||||||||||||||||||||||
Sbjct: 17 tgaaagacacgggtagtgagata 39




>34871_sko-mir-71:mirbase
          Length = 101

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 12 tgaaagacacgggtagtgagata 34
          |||||||||| ||||||||||||
Sbjct: 22 tgaaagacacaggtagtgagata 44




>34966_isc-mir-71:mirbase
          Length = 101

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 ctgaaagacacgggtagtgagat 33
          |||||||||| ||||||||||||
Sbjct: 21 ctgaaagacatgggtagtgagat 43




>35006_dpu-mir-71:mirbase
          Length = 101

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 ctgaaagacacgggtagtgagat 33
          |||||||||| ||||||||||||
Sbjct: 21 ctgaaagacatgggtagtgagat 43




>35359_ame-mir-71:mirbase
          Length = 100

 Score = 38.2 bits (19), Expect = 9e-04
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 11 ctgaaagacacgggtagtgagat 33
          |||||||||| ||||||||||||
Sbjct: 24 ctgaaagacatgggtagtgagat 46