miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>38867_lgi-mir-124:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 49 ctattaaggcacgctgtgaatgccaa 74
|||||||||||||| |||||||||||
Sbjct: 57 ctattaaggcacgcggtgaatgccaa 82
>24828_cin-mir-124-1:mirbase
Length = 77
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 53 taaggcacgctgtgaatgccaaggaatttt 82
|||||||||| ||||||||||| |||||||
Sbjct: 47 taaggcacgcggtgaatgccaacgaatttt 76
>34822_spu-mir-124:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaagg 76
|||||||||||| |||||||||||||
Sbjct: 59 attaaggcacgcggtgaatgccaagg 84
>38751_cte-mir-124:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 59 attaaggcacgcggtgaatgccaag 83
>24673_bfl-mir-124:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 59 attaaggcacgcggtgaatgccaag 83
>25473_pma-mir-124:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 47 attaaggcacgcggtgaatgccaag 71
>25763_xtr-mir-124:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 52 attaaggcacgcggtgaatgccaag 76
>25940_gga-mir-124a:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 50 attaaggcacgcggtgaatgccaag 74
>25941_gga-mir-124a-2:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 52 attaaggcacgcggtgaatgccaag 76
>26450_tgu-mir-124-1:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 79 attaaggcacgcggtgaatgccaag 103
>26451_tgu-mir-124-2:mirbase
Length = 71
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 39 attaaggcacgcggtgaatgccaag 63
>26452_tgu-mir-124-3:mirbase
Length = 131
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 99 attaaggcacgcggtgaatgccaag 123
>27007_eca-mir-124:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 43 attaaggcacgcggtgaatgccaag 67
>27372_mdo-mir-124a-1:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>27373_mdo-mir-124a-2:mirbase
Length = 93
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 55 attaaggcacgcggtgaatgccaag 79
>27374_mdo-mir-124a-3:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 42 attaaggcacgcggtgaatgccaag 66
>27506_age-mir-124a:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 60 attaaggcacgcggtgaatgccaag 84
>27569_lla-mir-124a:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 60 attaaggcacgcggtgaatgccaag 84
>27715_mml-mir-124a-1:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 60 attaaggcacgcggtgaatgccaag 84
>27716_mml-mir-124a-2:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>28300_ggo-mir-124a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 60 attaaggcacgcggtgaatgccaag 84
>28427_hsa-mir-124-1:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>28428_hsa-mir-124-2:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 60 attaaggcacgcggtgaatgccaag 84
>28429_hsa-mir-124-3:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>30087_ppa-mir-124a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 60 attaaggcacgcggtgaatgccaag 84
>30208_ptr-mir-124a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 60 attaaggcacgcggtgaatgccaag 84
>30815_ppy-mir-124-2:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>30816_ppy-mir-124a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 60 attaaggcacgcggtgaatgccaag 84
>31479_oan-mir-124:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 55 attaaggcacgcggtgaatgccaag 79
>31838_mmu-mir-124-1:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>31839_mmu-mir-124-2:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 60 attaaggcacgcggtgaatgccaag 84
>31840_mmu-mir-124-3:mirbase
Length = 68
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 42 attaaggcacgcggtgaatgccaag 66
>32717_rno-mir-124-1:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>32718_rno-mir-124-2:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 60 attaaggcacgcggtgaatgccaag 84
>32719_rno-mir-124-3:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>33198_bta-mir-124a-1:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>33199_bta-mir-124a-2:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 58 attaaggcacgcggtgaatgccaag 82
>33200_bta-mir-124b:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>33968_ssc-mir-124a-1:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 57 attaaggcacgcggtgaatgccaag 81
>33969_ssc-mir-124a-2:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 51 attaaggcacgcggtgaatgccaag 75
>34272_dre-mir-124-2:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 50 attaaggcacgcggtgaatgccaag 74
>34273_dre-mir-124-3:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 66 attaaggcacgcggtgaatgccaag 90
>34274_dre-mir-124-4:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 50 attaaggcacgcggtgaatgccaag 74
>34275_dre-mir-124-5:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 75 attaaggcacgcggtgaatgccaag 99
>34276_dre-mir-124-6:mirbase
Length = 113
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 64 attaaggcacgcggtgaatgccaag 88
>34585_fru-mir-124-1:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 49 attaaggcacgcggtgaatgccaag 73
>34586_fru-mir-124-2:mirbase
Length = 78
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 50 attaaggcacgcggtgaatgccaag 74
>34587_fru-mir-124-3:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 50 attaaggcacgcggtgaatgccaag 74
>34732_tni-mir-124-1:mirbase
Length = 67
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 41 attaaggcacgcggtgaatgccaag 65
>34733_tni-mir-124-2:mirbase
Length = 75
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 47 attaaggcacgcggtgaatgccaag 71
>34734_tni-mir-124-3:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 50 attaaggcacgcggtgaatgccaag 74
>34878_sko-mir-124:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 59 attaaggcacgcggtgaatgccaag 83
>34951_xbo-mir-124:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaag 75
|||||||||||| ||||||||||||
Sbjct: 62 attaaggcacgcggtgaatgccaag 86
>38943_emu-mir-124a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaa 74
|||||||||||| |||||||||||
Sbjct: 52 attaaggcacgcggtgaatgccaa 75
>38919_egr-mir-124a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaa 74
|||||||||||| |||||||||||
Sbjct: 52 attaaggcacgcggtgaatgccaa 75
>25942_gga-mir-124b:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaa 74
|||||||||||| |||||||||||
Sbjct: 49 attaaggcacgcagtgaatgccaa 72
>34271_dre-mir-124-1:mirbase
Length = 82
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 51 attaaggcacgctgtgaatgccaa 74
|||||||||||| |||||||||||
Sbjct: 49 attaaggcacgcggtgaatgccaa 72
