miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42148_osa-MIR812k:mirbase
Length = 226
Score = 151 bits (76), Expect = 3e-37
Identities = 123/141 (87%)
Strand = Plus / Minus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 153 gaaaaaatttaaaaacataagtcacaagtaaagtactattcatgttttatcatctcataa 94
Query: 150 caacaaaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
|||||||||| |||||||| ||| |||||||||| ||| ||||||||| |||||
Sbjct: 93 caacaaaaatgctaattataaaaaaatttcaaataagacggacgatcaaaattgagcgcg 34
Query: 210 gatacttatggttgtacttat 230
|| ||| |||| || ||||||
Sbjct: 33 gaaactcatggctgcacttat 13
Score = 40.1 bits (20), Expect = 8e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 176 ttttaaataagacgaacggtcaaaattgggcgcgga 211
|||| ||||||||||||||| ||| |||| ||||||
Sbjct: 160 tttttaataagacgaacggttaaagttggacgcgga 195
>42150_osa-MIR812m:mirbase
Length = 188
Score = 129 bits (65), Expect = 1e-30
Identities = 113/130 (86%), Gaps = 1/130 (0%)
Strand = Plus / Minus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataac 150
|||||| |||||||||||||||||||||||||||||||| || |||||| ||||||||||
Sbjct: 133 aaaaaaattaaaaacataagtcacgagtaaagtactattcatattttattatctcataac 74
Query: 151 aaca-aaaatactaattatnnnnnnnttttaaataagacgaacggtcaaaattgggcgcg 209
|||| |||||||||||||| ||| |||||||||| ||| ||||| |||||||||
Sbjct: 73 aacaaaaaatactaattataaaaaaatttcaaataagacggacgatcaaagttgggcgcg 14
Query: 210 gatacttatg 219
|| |||||||
Sbjct: 13 gaaacttatg 4
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 179 taaataagacgaacggtcaaaattgggcgcgga 211
||||||||||||||||| ||| |||| ||||||
Sbjct: 145 taaataagacgaacggttaaagttggacgcgga 177
>42149_osa-MIR812l:mirbase
Length = 242
Score = 91.7 bits (46), Expect = 2e-19
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand = Plus / Minus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
|||||||||||||| ||||||||||| ||||| |||||| |||||||||||||| ||||
Sbjct: 159 gaaaaaatttaaaa-cataagtcacgcgtaaaatactatgcatgttttatcatcttataa 101
Query: 150 caacaaaaatactaatta 167
||||||||||| ||||||
Sbjct: 100 caacaaaaatattaatta 83
Score = 61.9 bits (31), Expect = 2e-10
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 176 ttttaaataagacgaacggtcaaaattgggcgcggatacttatggttgtacttataatgg 235
|||||||||||||||||||| ||| |||| |||||| | |||||| || ||||| | |||
Sbjct: 168 ttttaaataagacgaacggttaaagttggacgcggaaaattatggatgcacttaaagtgg 227
Query: 236 gacggagagagtatt 250
|| |||| |||||||
Sbjct: 228 gatggagggagtatt 242
>42144_osa-MIR812g:mirbase
Length = 242
Score = 89.7 bits (45), Expect = 1e-18
Identities = 72/80 (90%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 91 aaaaaatttaaaaacataagtcacgagtaaagta--ctatttatgttttatcatctcata 148
|||||| |||||||||||||||| |||||||||| ||||| || |||||| ||||||||
Sbjct: 79 aaaaaaattaaaaacataagtcatgagtaaagtatactattcatattttattatctcata 138
Query: 149 acaacaaaaatactaattat 168
|||| |||||||||||||||
Sbjct: 139 acaataaaaatactaattat 158
>42152_osa-MIR812n:mirbase
Length = 203
Score = 77.8 bits (39), Expect = 4e-15
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
|||||||||||||||| |||||||||||| |||||||||||||| ||||||| | |||
Sbjct: 132 taaaaacataagtcacacataaagtactattcatgttttatcatctaataacaatagaaa 73
Query: 159 tactaat 165
|||||||
Sbjct: 72 tactaat 66
>42151_osa-MIR812n:mirbase
Length = 203
Score = 77.8 bits (39), Expect = 4e-15
Identities = 60/67 (89%)
Strand = Plus / Minus
Query: 99 taaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaa 158
|||||||||||||||| |||||||||||| |||||||||||||| ||||||| | |||
Sbjct: 132 taaaaacataagtcacacataaagtactattcatgttttatcatctaataacaatagaaa 73
Query: 159 tactaat 165
|||||||
Sbjct: 72 tactaat 66
>42147_osa-MIR812j:mirbase
Length = 297
Score = 71.9 bits (36), Expect = 2e-13
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| | ||||||| |||||||| |||| ||||||| ||||||||| |||| ||||
Sbjct: 106 gaaaaaactaaaaaacacaagtcacgcataaactactattcatgttttataatctaataa 165
Query: 150 caacaaaaatactaat 165
||| ||||||||||||
Sbjct: 166 caataaaaatactaat 181
>42139_osa-MIR812b:mirbase
Length = 170
Score = 65.9 bits (33), Expect = 1e-11
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 109 agtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaat 165
||||||| ||||||| |||| |||||||||||||| ||||||| ||||||||||||
Sbjct: 64 agtcacgcataaagtaatattcatgttttatcatctaataacaataaaaatactaat 120
Score = 40.1 bits (20), Expect = 8e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 180 aaataagacgaacggtcaaa 199
||||||||||||||||||||
Sbjct: 35 aaataagacgaacggtcaaa 16
>42154_osa-MIR812o:mirbase
Length = 173
Score = 63.9 bits (32), Expect = 6e-11
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| ||||||| |||||||| | ||||||| |||| |||||||||||||| | ||
Sbjct: 125 gaaaaaaattaaaaagataagtcatgcataaagtattattcatgttttatcatctaacaa 66
Query: 150 caacaaaaatactaat 165
|| ||||||||||||
Sbjct: 65 taataaaaatactaat 50
>42153_osa-MIR812o:mirbase
Length = 173
Score = 63.9 bits (32), Expect = 6e-11
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| ||||||| |||||||| | ||||||| |||| |||||||||||||| | ||
Sbjct: 125 gaaaaaaattaaaaagataagtcatgcataaagtattattcatgttttatcatctaacaa 66
Query: 150 caacaaaaatactaat 165
|| ||||||||||||
Sbjct: 65 taataaaaatactaat 50
>42143_osa-MIR812f:mirbase
Length = 179
Score = 63.9 bits (32), Expect = 6e-11
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataa 149
||||||| | || |||||||||||| ||||||||||||| |||||||| |||| ||||
Sbjct: 128 gaaaaaactaaagaacataagtcacacataaagtactatttgtgttttataatctaataa 69
Query: 150 caacaaaaatactaat 165
||| ||||||| ||||
Sbjct: 68 caataaaaatattaat 53
>42142_osa-MIR812e:mirbase
Length = 170
Score = 54.0 bits (27), Expect = 5e-08
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 107 taagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaat 165
||||||||| | ||||| ||||||| ||||||||||| ||||||| ||||||| ||||
Sbjct: 106 taagtcacgcatgaagtaatatttatattttatcatctaataacaataaaaatagtaat 48
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 55 caactttgaccatccgtcttattt 78
||||||||||| ||||||||||||
Sbjct: 12 caactttgaccgtccgtcttattt 35
>42141_osa-MIR812d:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 2e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 108 aagtcacgagtaaagtactatttatgttttatcatctcataacaacaaaaatactaat 165
|||||||| ||||||| |||| |||||||||||| | | ||||| ||||||||||||
Sbjct: 53 aagtcacgcataaagtattattcatgttttatcatataagaacaataaaaatactaat 110
>42138_osa-MIR812a:mirbase
Length = 234
Score = 52.0 bits (26), Expect = 2e-07
Identities = 82/103 (79%)
Strand = Plus / Minus
Query: 97 tttaaaaacataagtcacgagtaaagtactatttatgttttatcatctcataacaacaaa 156
|||||||| || |||||| |||| ||||||| |||||||||||| | ||||||| |||
Sbjct: 150 tttaaaaaaattagtcacacataaaatactattcatgttttatcatgtaataacaataaa 91
Query: 157 aatactaattatnnnnnnnttttaaataagacgaacggtcaaa 199
|||| |||| || ||| |||||||||||||| |||||
Sbjct: 90 aatagtaatcataaaaaattttcaaataagacgaacgatcaaa 48
>42140_osa-MIR812c:mirbase
Length = 164
Score = 50.1 bits (25), Expect = 8e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 90 gaaaaaatttaaaaacataagtcacgagtaaagtactatttatgttttatcat 142
||||||| |||||||||||||||| | |||| || |||| ||||||||||||
Sbjct: 38 gaaaaaaattaaaaacataagtcatgcataaaatattattcatgttttatcat 90
>42114_osa-MIR806e:mirbase
Length = 255
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 176 ttttaaataagacgaacggtcaaa 199
||||||||||||||||||||||||
Sbjct: 175 ttttaaataagacgaacggtcaaa 198
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaa 199
|||| |||||||||||||||||||
Sbjct: 81 ttttgaataagacgaacggtcaaa 58
>42145_osa-MIR812h:mirbase
Length = 187
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 134 ttttatcatctcataacaacaaaaatactaattat 168
|||||| |||||||||||| |||||||||| ||||
Sbjct: 113 ttttataatctcataacaataaaaatactatttat 79
>42117_osa-MIR806h:mirbase
Length = 271
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaa 199
|||| |||||||||||||||||||
Sbjct: 86 ttttgaataagacgaacggtcaaa 63
>42116_osa-MIR806g:mirbase
Length = 240
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 176 ttttaaataagacgaacggtcaaa 199
|||| |||||||||||||||||||
Sbjct: 168 ttttgaataagacgaacggtcaaa 191
>42115_osa-MIR806f:mirbase
Length = 241
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 176 ttttaaataagacgaacggtcaaa 199
|||| |||||||||||||||||||
Sbjct: 74 ttttgaataagacgaacggtcaaa 51
