miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39145_sme-mir-753c:mirbase
Length = 90
Score = 137 bits (69), Expect = 1e-33
Identities = 75/77 (97%)
Strand = Plus / Plus
Query: 1 taaagtatattttagagcttggattgtgatctcatatatttatgagatcattattcaagc 60
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 taaagtatatttaaaagcttggattgtgatctcatatatttatgagatcattattcaagc 66
Query: 61 tcttaaataatactttt 77
|||||||||||||||||
Sbjct: 67 tcttaaataatactttt 83
>39144_sme-mir-753b:mirbase
Length = 91
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1 taaagtatattttagagcttggattgtgatctcatatatttatgagatcattattcaagc 60
||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 7 taaagcatattttaaggcttgaattgtgatctcatatatttatgagatcattgttcaagc 66
Query: 61 tcttaaataatactttt 77
|||||||||||||||||
Sbjct: 67 tcttaaataatactttt 83
>39143_sme-mir-753b:mirbase
Length = 91
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1 taaagtatattttagagcttggattgtgatctcatatatttatgagatcattattcaagc 60
||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 7 taaagcatattttaaggcttgaattgtgatctcatatatttatgagatcattgttcaagc 66
Query: 61 tcttaaataatactttt 77
|||||||||||||||||
Sbjct: 67 tcttaaataatactttt 83
>39147_sme-mir-753d:mirbase
Length = 58
Score = 85.7 bits (43), Expect = 4e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 17 gcttggattgtgatctcatatatttatgagatcattattcaagctct 63
||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6 gcttggattgtgatctcgtatatttatgagatcattattcaagctct 52
>39146_sme-mir-753d:mirbase
Length = 58
Score = 85.7 bits (43), Expect = 4e-18
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 17 gcttggattgtgatctcatatatttatgagatcattattcaagctct 63
||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6 gcttggattgtgatctcgtatatttatgagatcattattcaagctct 52
>39148_sme-mir-753e:mirbase
Length = 57
Score = 65.9 bits (33), Expect = 4e-12
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 17 gcttggattgtgatctcatatatttatgagatcattattcaagctcttaaata 69
||||| |||||||||||||| | |||||||||||||||||||||||| ||||
Sbjct: 5 gcttgaattgtgatctcataaacctatgagatcattattcaagctcttcaata 57
Score = 38.2 bits (19), Expect = 9e-04
Identities = 40/47 (85%)
Strand = Plus / Minus
Query: 14 agagcttggattgtgatctcatatatttatgagatcattattcaagc 60
|||||||| || |||||||||| |||||||||||| ||||||||
Sbjct: 51 agagcttgaataatgatctcataggtttatgagatcacaattcaagc 5
