miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39143_sme-mir-753b:mirbase
Length = 91
Score = 180 bits (91), Expect = 1e-46
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 tttttataaagcatattttaaggcttgaattgtgatctcatatatttatgagatcattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttttataaagcatattttaaggcttgaattgtgatctcatatatttatgagatcattgt 60
Query: 61 tcaagctcttaaataatacttttcatcattg 91
|||||||||||||||||||||||||||||||
Sbjct: 61 tcaagctcttaaataatacttttcatcattg 91
>39145_sme-mir-753c:mirbase
Length = 90
Score = 127 bits (64), Expect = 1e-30
Identities = 82/88 (93%)
Strand = Plus / Plus
Query: 1 tttttataaagcatattttaaggcttgaattgtgatctcatatatttatgagatcattgt 60
|||| |||||| |||||| || ||||| |||||||||||||||||||||||||||||| |
Sbjct: 1 ttttaataaagtatatttaaaagcttggattgtgatctcatatatttatgagatcattat 60
Query: 61 tcaagctcttaaataatacttttcatca 88
||||||||||||||||||||||||||||
Sbjct: 61 tcaagctcttaaataatacttttcatca 88
>39142_sme-mir-753:mirbase
Length = 77
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 7 taaagcatattttaaggcttgaattgtgatctcatatatttatgagatcattgttcaagc 66
||||| |||||||| ||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 1 taaagtatattttagagcttggattgtgatctcatatatttatgagatcattattcaagc 60
Query: 67 tcttaaataatactttt 83
|||||||||||||||||
Sbjct: 61 tcttaaataatactttt 77
>39148_sme-mir-753e:mirbase
Length = 57
Score = 73.8 bits (37), Expect = 2e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 19 taaggcttgaattgtgatctcatatatttatgagatcattgttcaagctcttaaata 75
|||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||
Sbjct: 1 taaggcttgaattgtgatctcataaacctatgagatcattattcaagctcttcaata 57
>39147_sme-mir-753d:mirbase
Length = 58
Score = 71.9 bits (36), Expect = 7e-14
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 22 ggcttgaattgtgatctcatatatttatgagatcattgttcaagctct 69
|||||| ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 5 ggcttggattgtgatctcgtatatttatgagatcattattcaagctct 52
>39146_sme-mir-753d:mirbase
Length = 58
Score = 71.9 bits (36), Expect = 7e-14
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 22 ggcttgaattgtgatctcatatatttatgagatcattgttcaagctct 69
|||||| ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 5 ggcttggattgtgatctcgtatatttatgagatcattattcaagctct 52
