miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39144_sme-mir-753b:mirbase
Length = 91
Score = 73.8 bits (37), Expect = 1e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1 taaggcttgaattgtgatctcataaacctatgagatcattattcaagctcttcaata 57
|||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||
Sbjct: 19 taaggcttgaattgtgatctcatatatttatgagatcattgttcaagctcttaaata 75
>39143_sme-mir-753b:mirbase
Length = 91
Score = 73.8 bits (37), Expect = 1e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 1 taaggcttgaattgtgatctcataaacctatgagatcattattcaagctcttcaata 57
|||||||||||||||||||||||| | |||||||||||| ||||||||||| ||||
Sbjct: 19 taaggcttgaattgtgatctcatatatttatgagatcattgttcaagctcttaaata 75
>39145_sme-mir-753c:mirbase
Length = 90
Score = 65.9 bits (33), Expect = 3e-12
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 5 gcttgaattgtgatctcataaacctatgagatcattattcaagctcttcaata 57
||||| |||||||||||||| | |||||||||||||||||||||||| ||||
Sbjct: 23 gcttggattgtgatctcatatatttatgagatcattattcaagctcttaaata 75
>39142_sme-mir-753:mirbase
Length = 77
Score = 65.9 bits (33), Expect = 3e-12
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 5 gcttgaattgtgatctcataaacctatgagatcattattcaagctcttcaata 57
||||| |||||||||||||| | |||||||||||||||||||||||| ||||
Sbjct: 17 gcttggattgtgatctcatatatttatgagatcattattcaagctcttaaata 69
Score = 38.2 bits (19), Expect = 6e-04
Identities = 40/47 (85%)
Strand = Plus / Minus
Query: 5 gcttgaattgtgatctcataaacctatgagatcattattcaagctct 51
|||||||| |||||||||||| |||||||||| || ||||||||
Sbjct: 60 gcttgaataatgatctcataaatatatgagatcacaatccaagctct 14
>39147_sme-mir-753d:mirbase
Length = 58
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 4 ggcttgaattgtgatctcataaacctatgagatcattattcaagctct 51
|||||| ||||||||||| || | |||||||||||||||||||||||
Sbjct: 5 ggcttggattgtgatctcgtatatttatgagatcattattcaagctct 52
>39146_sme-mir-753d:mirbase
Length = 58
Score = 56.0 bits (28), Expect = 2e-09
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 4 ggcttgaattgtgatctcataaacctatgagatcattattcaagctct 51
|||||| ||||||||||| || | |||||||||||||||||||||||
Sbjct: 5 ggcttggattgtgatctcgtatatttatgagatcattattcaagctct 52
