miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39154_sme-mir-754d:mirbase
Length = 94
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 acccagcatgttgcttggggttattactatatttattaatatagttttatcttcaagcaa 60
|||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||
Sbjct: 12 acccagcatgttgcttgggggtattattatatttattgatatagttttatcttcaagcaa 71
Query: 61 tatcagatgtgga 73
||||||| |||||
Sbjct: 72 tatcagaggtgga 84
>39153_sme-mir-754c-2:mirbase
Length = 78
Score = 113 bits (57), Expect = 2e-26
Identities = 70/73 (95%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 acccagcatgttgcttggggttattactatatttattaatatagttttatcttcaagcaa 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 5 acccagcatgttgcttggggt-attactatatttattaatatagttttatcttcatgcaa 63
Query: 61 tatcagatgtgga 73
||||||| |||||
Sbjct: 64 tatcagaggtgga 76
>39152_sme-mir-754c-1:mirbase
Length = 93
Score = 113 bits (57), Expect = 2e-26
Identities = 70/73 (95%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 acccagcatgttgcttggggttattactatatttattaatatagttttatcttcaagcaa 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 12 acccagcatgttgcttggggt-attactatatttattaatatagttttatcttcaagcaa 70
Query: 61 tatcagatgtgga 73
|||| || |||||
Sbjct: 71 tatcggaggtgga 83
>39151_sme-mir-754b-2:mirbase
Length = 86
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 acccagcatgttgcttggggttattactatatttattaatatagttttatcttcaagcaa 60
|||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||
Sbjct: 10 acccagcatgttgcttgggggtattactatatttattaatataattttatcatcaagcaa 69
Query: 61 tatcagatgtgga 73
||||||| |||||
Sbjct: 70 tatcagaggtgga 82
>39150_sme-mir-754b-1:mirbase
Length = 94
Score = 109 bits (55), Expect = 3e-25
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 1 acccagcatgttgcttggggttattactatatttattaatatagttttatcttcaagcaa 60
|||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||
Sbjct: 12 acccagcatgttgcttgggggtattactatatttattaatataattttatcatcaagcaa 71
Query: 61 tatcaga 67
|||||||
Sbjct: 72 tatcaga 78
