miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39164_sme-mir-2147c:mirbase
Length = 96
Score = 69.9 bits (35), Expect = 3e-13
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 15 taacggcggaaaactcgcacgtgtcctcgtcaacttcacgatttcacggcgagtgttccc 74
|||||||||||||||||| |||| | ||||| ||||||||| ||||||| ||||||||
Sbjct: 15 taacggcggaaaactcgctcgtgccatcgtcgtcttcacgatgtcacggcaggtgttccc 74
Query: 75 acgttatttccaatt 89
|||||| | ||||||
Sbjct: 75 acgttaatcccaatt 89
>39166_sme-mir-2147d:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 43 gtcaacttcacgatttcacggcgagtgttcccacgttatttcca 86
||||||||||| ||||||| |||| |||||||| |||| |||||
Sbjct: 44 gtcaacttcacaatttcactgcgactgttcccatgttacttcca 87
>39165_sme-mir-2147d:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 43 gtcaacttcacgatttcacggcgagtgttcccacgttatttcca 86
||||||||||| ||||||| |||| |||||||| |||| |||||
Sbjct: 44 gtcaacttcacaatttcactgcgactgttcccatgttacttcca 87
>39162_sme-mir-2147a:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 2 cttctttggatactaacggcggaaaactcgcacgtg 37
||||||||||| | |||||||||| |||||||||||
Sbjct: 2 cttctttggatgccaacggcggaagactcgcacgtg 37
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 55 atttcacggcgagtgttcccacgttatttccaattctc 92
||||||| |||||||||||| |||| |||||||||||
Sbjct: 56 atttcactgcgagtgttcccgcgttgattccaattctc 93
