miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39165_sme-mir-2147d:mirbase
Length = 97
Score = 192 bits (97), Expect = 3e-50
Identities = 97/97 (100%)
Strand = Plus / Plus
Query: 1 ttgcttttggatgttaacatcggaaaactcgcaccgtgatattgtcaacttcacaatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgcttttggatgttaacatcggaaaactcgcaccgtgatattgtcaacttcacaatttc 60
Query: 61 actgcgactgttcccatgttacttccagttttcggca 97
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgcgactgttcccatgttacttccagttttcggca 97
>39206_sme-mir-2174:mirbase
Length = 93
Score = 65.9 bits (33), Expect = 5e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 13 gttaacatcggaaaactcgcaccgtgatattgtcaacttcacaatttcactgcgactgtt 72
|||||||||||||||| |||| | | |||||||||| |||||||||| ||| || ||||
Sbjct: 11 gttaacatcggaaaacccgcattgcgttattgtcaacctcacaatttcgctgtgagtgtt 70
Query: 73 cccatgtta 81
|||||||||
Sbjct: 71 cccatgtta 79
>39163_sme-mir-2147b:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 44 gtcaacttcacaatttcactgcgactgttcccatgttacttcca 87
||||||||||| ||||||| |||| |||||||| |||| |||||
Sbjct: 43 gtcaacttcacgatttcacggcgagtgttcccacgttatttcca 86
