miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39248_nve-mir-2024a-2:mirbase
Length = 63
Score = 125 bits (63), Expect = 4e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacacagtaccgatattgtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacacagtaccgatattgtgaa 60
Query: 61 gca 63
|||
Sbjct: 61 gca 63
>39247_nve-mir-2024a-1:mirbase
Length = 63
Score = 125 bits (63), Expect = 4e-30
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacacagtaccgatattgtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacacagtaccgatattgtgaa 60
Query: 61 gca 63
|||
Sbjct: 61 gca 63
>39250_nve-mir-2024b:mirbase
Length = 85
Score = 109 bits (55), Expect = 2e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacacagtaccgatattgtgaa 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 9 tgcttcaaaatatcggtgttgggtaaaaggtcacattttcaacagtaccgatattgtgaa 68
Query: 61 gca 63
|||
Sbjct: 69 gca 71
>39259_nve-mir-2024g-3:mirbase
Length = 89
Score = 103 bits (52), Expect = 1e-23
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacatttt-acacagtaccgatattgtga 59
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 16 tgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacacagtaccgatattgtga 75
Query: 60 agca 63
||||
Sbjct: 76 agca 79
>39258_nve-mir-2024g-2:mirbase
Length = 89
Score = 103 bits (52), Expect = 1e-23
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacatttt-acacagtaccgatattgtga 59
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 16 tgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacacagtaccgatattgtga 75
Query: 60 agca 63
||||
Sbjct: 76 agca 79
>39257_nve-mir-2024g-1:mirbase
Length = 89
Score = 103 bits (52), Expect = 1e-23
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacatttt-acacagtaccgatattgtga 59
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 16 tgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacacagtaccgatattgtga 75
Query: 60 agca 63
||||
Sbjct: 76 agca 79
>39252_nve-mir-2024d:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 7e-07
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacaca 44
||||||| ||||| |||| |||| ||||||||||||||| ||||
Sbjct: 14 tgcttcagaatattggtgctgggcaaaaggtcacattttgcaca 57
>39251_nve-mir-2024c:mirbase
Length = 58
Score = 42.1 bits (21), Expect = 4e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 4 ttcaaaatatcggtgttgggtaaaaggtcacattttacaca 44
|||| ||||| |||| |||| ||||||||||||||| ||||
Sbjct: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcaca 41
>39255_nve-mir-2024e-3:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 20 tgggtaaaaggtcacattttacacagtaccgatatt 55
|||| ||||||||||||||| |||| |||| |||||
Sbjct: 34 tgggcaaaaggtcacattttgcacattaccaatatt 69
>39254_nve-mir-2024e-2:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 20 tgggtaaaaggtcacattttacacagtaccgatatt 55
|||| ||||||||||||||| |||| |||| |||||
Sbjct: 34 tgggcaaaaggtcacattttgcacattaccaatatt 69
>39253_nve-mir-2024e-1:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 20 tgggtaaaaggtcacattttacacagtaccgatatt 55
|||| ||||||||||||||| |||| |||| |||||
Sbjct: 34 tgggcaaaaggtcacattttgcacattaccaatatt 69
