miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39259_nve-mir-2024g-3:mirbase
Length = 89
Score = 131 bits (66), Expect = 9e-32
Identities = 79/82 (96%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 agtgctactgcttcaaaatatcggtgttgggtaaaaggtcacattttca-acagtaccga 59
|||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||
Sbjct: 8 agtgctactgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacacagtaccga 67
Query: 60 tattgtgaagcacgtttgcaaa 81
||||||||||||||||||||||
Sbjct: 68 tattgtgaagcacgtttgcaaa 89
>39258_nve-mir-2024g-2:mirbase
Length = 89
Score = 131 bits (66), Expect = 9e-32
Identities = 79/82 (96%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 agtgctactgcttcaaaatatcggtgttgggtaaaaggtcacattttca-acagtaccga 59
|||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||
Sbjct: 8 agtgctactgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacacagtaccga 67
Query: 60 tattgtgaagcacgtttgcaaa 81
||||||||||||||||||||||
Sbjct: 68 tattgtgaagcacgtttgcaaa 89
>39257_nve-mir-2024g-1:mirbase
Length = 89
Score = 131 bits (66), Expect = 9e-32
Identities = 79/82 (96%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 1 agtgctactgcttcaaaatatcggtgttgggtaaaaggtcacattttca-acagtaccga 59
|||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||
Sbjct: 8 agtgctactgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacacagtaccga 67
Query: 60 tattgtgaagcacgtttgcaaa 81
||||||||||||||||||||||
Sbjct: 68 tattgtgaagcacgtttgcaaa 89
>39249_nve-mir-2024a-3:mirbase
Length = 63
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 9 tgcttcaaaatatcggtgttgggtaaaaggtcacattttcaacagtaccgatattgtgaa 68
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacacagtaccgatattgtgaa 60
Query: 69 gca 71
|||
Sbjct: 61 gca 63
>39248_nve-mir-2024a-2:mirbase
Length = 63
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 9 tgcttcaaaatatcggtgttgggtaaaaggtcacattttcaacagtaccgatattgtgaa 68
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacacagtaccgatattgtgaa 60
Query: 69 gca 71
|||
Sbjct: 61 gca 63
>39247_nve-mir-2024a-1:mirbase
Length = 63
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 9 tgcttcaaaatatcggtgttgggtaaaaggtcacattttcaacagtaccgatattgtgaa 68
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacacagtaccgatattgtgaa 60
Query: 69 gca 71
|||
Sbjct: 61 gca 63
>39252_nve-mir-2024d:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 9 tgcttcaaaatatcggtgttgggtaaaaggtcacatttt 47
||||||| ||||| |||| |||| |||||||||||||||
Sbjct: 14 tgcttcagaatattggtgctgggcaaaaggtcacatttt 52
>39251_nve-mir-2024c:mirbase
Length = 58
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 12 ttcaaaatatcggtgttgggtaaaaggtcacatttt 47
|||| ||||| |||| |||| |||||||||||||||
Sbjct: 1 ttcagaatattggtgctgggcaaaaggtcacatttt 36
