miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39252_nve-mir-2024d:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 2e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcacaacaccaatattctgagg 58
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 17 ttcagaatattggtgctgggcaaaaggtcacattttgcacaattccaatattctgagg 74
Score = 38.2 bits (19), Expect = 6e-04
Identities = 46/55 (83%)
Strand = Plus / Minus
Query: 2 tcagaatattggtgctgggcaaaaggtcacattttgcacaacaccaatattctga 56
|||||||||||| || |||||| || || |||||| || ||||||||||||||
Sbjct: 72 tcagaatattggaattgtgcaaaatgtgaccttttgcccagcaccaatattctga 18
>39256_nve-mir-2024f:mirbase
Length = 110
Score = 83.8 bits (42), Expect = 1e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcacaacaccaatattctgagg 58
|||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||
Sbjct: 20 ttcagaatattggtactgggcaaaaggtcacgttttgcacatcaccaatgttctgagg 77
Score = 38.2 bits (19), Expect = 6e-04
Identities = 46/55 (83%)
Strand = Plus / Minus
Query: 2 tcagaatattggtgctgggcaaaaggtcacattttgcacaacaccaatattctga 56
|||||| ||||||| || |||||| || || |||||| || |||||||||||||
Sbjct: 75 tcagaacattggtgatgtgcaaaacgtgaccttttgcccagtaccaatattctga 21
>39255_nve-mir-2024e-3:mirbase
Length = 94
Score = 83.8 bits (42), Expect = 1e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcacaacaccaatattctgagg 58
|||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 18 ttcagagtattggcgctgggcaaaaggtcacattttgcacattaccaatattctgagg 75
>39254_nve-mir-2024e-2:mirbase
Length = 94
Score = 83.8 bits (42), Expect = 1e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcacaacaccaatattctgagg 58
|||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 18 ttcagagtattggcgctgggcaaaaggtcacattttgcacattaccaatattctgagg 75
>39253_nve-mir-2024e-1:mirbase
Length = 94
Score = 83.8 bits (42), Expect = 1e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcacaacaccaatattctgagg 58
|||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 18 ttcagagtattggcgctgggcaaaaggtcacattttgcacattaccaatattctgagg 75
>39249_nve-mir-2024a-3:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 4e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcaca 41
|||| ||||| |||| |||| ||||||||||||||| ||||
Sbjct: 4 ttcaaaatatcggtgttgggtaaaaggtcacattttacaca 44
>39248_nve-mir-2024a-2:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 4e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcaca 41
|||| ||||| |||| |||| ||||||||||||||| ||||
Sbjct: 4 ttcaaaatatcggtgttgggtaaaaggtcacattttacaca 44
>39247_nve-mir-2024a-1:mirbase
Length = 63
Score = 42.1 bits (21), Expect = 4e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcaca 41
|||| ||||| |||| |||| ||||||||||||||| ||||
Sbjct: 4 ttcaaaatatcggtgttgggtaaaaggtcacattttacaca 44
>39250_nve-mir-2024b:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 1 ttcagaatattggtgctgggcaaaaggtcacatttt 36
|||| ||||| |||| |||| |||||||||||||||
Sbjct: 12 ttcaaaatatcggtgttgggtaaaaggtcacatttt 47
