miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39255_nve-mir-2024e-3:mirbase
Length = 94
Score = 141 bits (71), Expect = 9e-35
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 1 catcaggtagacttgcttcagaatattggtgctgggcaaaaggtcacattttgcacaatt 60
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
Sbjct: 2 catcaggtagacttgcttcagagtattggcgctgggcaaaaggtcacattttgcacatta 61
Query: 61 ccaatattctgaggcacttctgctgaa 87
|||||||||||||||||||||||||||
Sbjct: 62 ccaatattctgaggcacttctgctgaa 88
>39254_nve-mir-2024e-2:mirbase
Length = 94
Score = 141 bits (71), Expect = 9e-35
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 1 catcaggtagacttgcttcagaatattggtgctgggcaaaaggtcacattttgcacaatt 60
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
Sbjct: 2 catcaggtagacttgcttcagagtattggcgctgggcaaaaggtcacattttgcacatta 61
Query: 61 ccaatattctgaggcacttctgctgaa 87
|||||||||||||||||||||||||||
Sbjct: 62 ccaatattctgaggcacttctgctgaa 88
>39253_nve-mir-2024e-1:mirbase
Length = 94
Score = 141 bits (71), Expect = 9e-35
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 1 catcaggtagacttgcttcagaatattggtgctgggcaaaaggtcacattttgcacaatt 60
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
Sbjct: 2 catcaggtagacttgcttcagagtattggcgctgggcaaaaggtcacattttgcacatta 61
Query: 61 ccaatattctgaggcacttctgctgaa 87
|||||||||||||||||||||||||||
Sbjct: 62 ccaatattctgaggcacttctgctgaa 88
>39256_nve-mir-2024f:mirbase
Length = 110
Score = 119 bits (60), Expect = 3e-28
Identities = 78/84 (92%)
Strand = Plus / Plus
Query: 4 caggtagacttgcttcagaatattggtgctgggcaaaaggtcacattttgcacaattcca 63
||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||
Sbjct: 7 caggtagacttgcttcagaatattggtactgggcaaaaggtcacgttttgcacatcacca 66
Query: 64 atattctgaggcacttctgctgaa 87
|| |||||||||||||||||||||
Sbjct: 67 atgttctgaggcacttctgctgaa 90
Score = 38.2 bits (19), Expect = 0.001
Identities = 46/55 (83%)
Strand = Plus / Minus
Query: 18 tcagaatattggtgctgggcaaaaggtcacattttgcacaattccaatattctga 72
|||||| ||||||| || |||||| || || |||||| || | ||||||||||||
Sbjct: 75 tcagaacattggtgatgtgcaaaacgtgaccttttgcccagtaccaatattctga 21
>39251_nve-mir-2024c:mirbase
Length = 58
Score = 99.6 bits (50), Expect = 3e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 17 ttcagaatattggtgctgggcaaaaggtcacattttgcacaattccaatattctgagg 74
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcacaacaccaatattctgagg 58
Score = 38.2 bits (19), Expect = 0.001
Identities = 46/55 (83%)
Strand = Plus / Minus
Query: 18 tcagaatattggtgctgggcaaaaggtcacattttgcacaattccaatattctga 72
|||||||||||||| || |||||| || || |||||| || ||||||||||||
Sbjct: 56 tcagaatattggtgttgtgcaaaatgtgaccttttgcccagcaccaatattctga 2
>39249_nve-mir-2024a-3:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 14 tgcttcagaatattggtgctgggcaaaaggtcacattttgcaca 57
||||||| ||||| |||| |||| ||||||||||||||| ||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacaca 44
>39248_nve-mir-2024a-2:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 14 tgcttcagaatattggtgctgggcaaaaggtcacattttgcaca 57
||||||| ||||| |||| |||| ||||||||||||||| ||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacaca 44
>39247_nve-mir-2024a-1:mirbase
Length = 63
Score = 48.1 bits (24), Expect = 1e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 14 tgcttcagaatattggtgctgggcaaaaggtcacattttgcaca 57
||||||| ||||| |||| |||| ||||||||||||||| ||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacattttacaca 44
>39250_nve-mir-2024b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 14 tgcttcagaatattggtgctgggcaaaaggtcacatttt 52
||||||| ||||| |||| |||| |||||||||||||||
Sbjct: 9 tgcttcaaaatatcggtgttgggtaaaaggtcacatttt 47
