miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39254_nve-mir-2024e-2:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 acatcaggtagacttgcttcagagtattggcgctgggcaaaaggtcacattttgcacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatcaggtagacttgcttcagagtattggcgctgggcaaaaggtcacattttgcacatt 60
Query: 61 accaatattctgaggcacttctgctgaaggaact 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 accaatattctgaggcacttctgctgaaggaact 94
>39253_nve-mir-2024e-1:mirbase
Length = 94
Score = 186 bits (94), Expect = 2e-48
Identities = 94/94 (100%)
Strand = Plus / Plus
Query: 1 acatcaggtagacttgcttcagagtattggcgctgggcaaaaggtcacattttgcacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acatcaggtagacttgcttcagagtattggcgctgggcaaaaggtcacattttgcacatt 60
Query: 61 accaatattctgaggcacttctgctgaaggaact 94
||||||||||||||||||||||||||||||||||
Sbjct: 61 accaatattctgaggcacttctgctgaaggaact 94
>39252_nve-mir-2024d:mirbase
Length = 87
Score = 141 bits (71), Expect = 1e-34
Identities = 83/87 (95%)
Strand = Plus / Plus
Query: 2 catcaggtagacttgcttcagagtattggcgctgggcaaaaggtcacattttgcacatta 61
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |
Sbjct: 1 catcaggtagacttgcttcagaatattggtgctgggcaaaaggtcacattttgcacaatt 60
Query: 62 ccaatattctgaggcacttctgctgaa 88
|||||||||||||||||||||||||||
Sbjct: 61 ccaatattctgaggcacttctgctgaa 87
>39256_nve-mir-2024f:mirbase
Length = 110
Score = 131 bits (66), Expect = 1e-31
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 5 caggtagacttgcttcagagtattggcgctgggcaaaaggtcacattttgcacattacca 64
||||||||||||||||||| |||||| |||||||||||||||| |||||||||| ||||
Sbjct: 7 caggtagacttgcttcagaatattggtactgggcaaaaggtcacgttttgcacatcacca 66
Query: 65 atattctgaggcacttctgctgaaggaact 94
|| |||||||||||||||||||||||||||
Sbjct: 67 atgttctgaggcacttctgctgaaggaact 96
>39251_nve-mir-2024c:mirbase
Length = 58
Score = 83.8 bits (42), Expect = 2e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 18 ttcagagtattggcgctgggcaaaaggtcacattttgcacattaccaatattctgagg 75
|||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 ttcagaatattggtgctgggcaaaaggtcacattttgcacaacaccaatattctgagg 58
>39249_nve-mir-2024a-3:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 34 tgggcaaaaggtcacattttgcacattaccaatatt 69
|||| ||||||||||||||| |||| |||| |||||
Sbjct: 20 tgggtaaaaggtcacattttacacagtaccgatatt 55
>39248_nve-mir-2024a-2:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 34 tgggcaaaaggtcacattttgcacattaccaatatt 69
|||| ||||||||||||||| |||| |||| |||||
Sbjct: 20 tgggtaaaaggtcacattttacacagtaccgatatt 55
>39247_nve-mir-2024a-1:mirbase
Length = 63
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 34 tgggcaaaaggtcacattttgcacattaccaatatt 69
|||| ||||||||||||||| |||| |||| |||||
Sbjct: 20 tgggtaaaaggtcacattttacacagtaccgatatt 55
