miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39259_nve-mir-2024g-3:mirbase
Length = 89
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 accaataagtgctactgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaataagtgctactgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacaca 60
Query: 61 gtaccgatattgtgaagcacgtttgcaaa 89
|||||||||||||||||||||||||||||
Sbjct: 61 gtaccgatattgtgaagcacgtttgcaaa 89
>39258_nve-mir-2024g-2:mirbase
Length = 89
Score = 176 bits (89), Expect = 2e-45
Identities = 89/89 (100%)
Strand = Plus / Plus
Query: 1 accaataagtgctactgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaataagtgctactgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacaca 60
Query: 61 gtaccgatattgtgaagcacgtttgcaaa 89
|||||||||||||||||||||||||||||
Sbjct: 61 gtaccgatattgtgaagcacgtttgcaaa 89
>39250_nve-mir-2024b:mirbase
Length = 85
Score = 131 bits (66), Expect = 9e-32
Identities = 79/82 (96%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 8 agtgctactgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacacagtaccga 67
|||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||
Sbjct: 1 agtgctactgcttcaaaatatcggtgttgggtaaaaggtcacattttca-acagtaccga 59
Query: 68 tattgtgaagcacgtttgcaaa 89
||||||||||||||||||||||
Sbjct: 60 tattgtgaagcacgtttgcaaa 81
>39249_nve-mir-2024a-3:mirbase
Length = 63
Score = 103 bits (52), Expect = 2e-23
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 16 tgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacacagtaccgatattgtga 75
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacatttt-acacagtaccgatattgtga 59
Query: 76 agca 79
||||
Sbjct: 60 agca 63
>39248_nve-mir-2024a-2:mirbase
Length = 63
Score = 103 bits (52), Expect = 2e-23
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 16 tgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacacagtaccgatattgtga 75
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacatttt-acacagtaccgatattgtga 59
Query: 76 agca 79
||||
Sbjct: 60 agca 63
>39247_nve-mir-2024a-1:mirbase
Length = 63
Score = 103 bits (52), Expect = 2e-23
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 16 tgcttcaaaatatcggtgttgggtaaaaggtcaccttttaacacagtaccgatattgtga 75
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 1 tgcttcaaaatatcggtgttgggtaaaaggtcacatttt-acacagtaccgatattgtga 59
Query: 76 agca 79
||||
Sbjct: 60 agca 63
