miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39324_cre-MIR1144a:mirbase
Length = 239
Score = 468 bits (236), Expect = e-132
Identities = 239/239 (100%)
Strand = Plus / Plus
Query: 1 cggcggcgttggactgctggggtgcagcaggcttggaaccgggcacgcaggaggtgggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggcggcgttggactgctggggtgcagcaggcttggaaccgggcacgcaggaggtgggtt 60
Query: 61 ttgtggcggcaggnagcaggcagcgcggggctgctggtggtggtggaggaggatgaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtggcggcaggnagcaggcagcgcggggctgctggtggtggtggaggaggatgaagtt 120
Query: 121 cgccattcaaacaaccctttctgcaccggtcctgtgctgcccgttgcctgcaggagcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgccattcaaacaaccctttctgcaccggtcctgtgctgcccgttgcctgcaggagcaaa 180
Query: 181 acacacccactccgtgtccggctccaagattgctgaacccctgtcgctggctgctgccg 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acacacccactccgtgtccggctccaagattgctgaacccctgtcgctggctgctgccg 239
>39326_cre-MIR1144b:mirbase
Length = 204
Score = 121 bits (61), Expect = 3e-28
Identities = 84/92 (91%)
Strand = Plus / Plus
Query: 22 gtgcagcaggcttggaaccgggcacgcaggaggtgggttttgtggcggcaggnagcaggc 81
||||||||||||||| ||||||||||| |||||||||| |||||||||||| |||||||
Sbjct: 1 gtgcagcaggcttggtaccgggcacgccggaggtgggtagtgtggcggcaggcagcaggc 60
Query: 82 agcgcggggctgctggtggtggtggaggagga 113
||||||||||||||||||||||||| ||||
Sbjct: 61 ctcgcggggctgctggtggtggtggagcagga 92
