miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39335_cre-MIR1149:mirbase
Length = 114
Score = 226 bits (114), Expect = 3e-60
Identities = 114/114 (100%)
Strand = Plus / Plus
Query: 1 cgaccgcctcgggcccgctatgtcggacaacaccgacccccagcccgccaacaaggagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgaccgcctcgggcccgctatgtcggacaacaccgacccccagcccgccaacaaggagat 60
Query: 61 ggcgttggcgggctggggtcggtgttgtctgacatggagggtcccaggcagtcg 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggcgttggcgggctggggtcggtgttgtctgacatggagggtcccaggcagtcg 114
Score = 42.1 bits (21), Expect = 9e-05
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Minus
Query: 64 gttggcgggctgggg-tcggtgttgtctgacat 95
||||||||||||||| ||||||||||| |||||
Sbjct: 52 gttggcgggctgggggtcggtgttgtccgacat 20
Score = 42.1 bits (21), Expect = 9e-05
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Minus
Query: 20 atgtcggacaacaccgacccccagcccgccaac 52
||||| ||||||||||| |||||||||||||||
Sbjct: 95 atgtcagacaacaccga-ccccagcccgccaac 64