miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39424_pta-MIR319:mirbase
          Length = 206

 Score =  408 bits (206), Expect = e-115
 Identities = 206/206 (100%)
 Strand = Plus / Minus

                                                                       
Query: 5   tgttggagctcccttcagtccaaccaaagcttgtgcagcggtggttcagctgctgattca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tgttggagctcccttcagtccaaccaaagcttgtgcagcggtggttcagctgctgattca 147

                                                                       
Query: 65  tgcattctacttccctgtccgtgactctccagcagcctgaacaaatcaatcaatcgacct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 tgcattctacttccctgtccgtgactctccagcagcctgaacaaatcaatcaatcgacct 87

                                                                       
Query: 125 gcatgacaggatagtggtgtgcatgacgcaggagatgtactgtcactaaacacgcatttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  gcatgacaggatagtggtgtgcatgacgcaggagatgtactgtcactaaacacgcatttc 27

                                     
Query: 185 ttggattgaagggagctccacttatc 210
           ||||||||||||||||||||||||||
Sbjct: 26  ttggattgaagggagctccacttatc 1




>41302_ptc-MIR159d:mirbase
          Length = 194

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 181 tttcttggattgaagggagctcc 203
           |||||||||||||||||||||||
Sbjct: 162 tttcttggattgaagggagctcc 184




>41919_osa-MIR159c:mirbase
          Length = 197

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 185 ttggattgaagggagctccac 205
           |||||||||||||||||||||
Sbjct: 168 ttggattgaagggagctccac 188




>40703_mtr-MIR319:mirbase
          Length = 207

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 9   ggagctcccttcagtccaaccaaag 33
           ||||||||||||||||||| |||||
Sbjct: 187 ggagctcccttcagtccaagcaaag 163




>40069_ath-MIR319a:mirbase
          Length = 176

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 9   ggagctcccttcagtccaaccaaag 33
           ||||||||||||||||||| |||||
Sbjct: 172 ggagctcccttcagtccaatcaaag 148




>39858_aly-MIR319a:mirbase
          Length = 221

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 9   ggagctcccttcagtccaaccaaag 33
           ||||||||||||||||||| |||||
Sbjct: 195 ggagctcccttcagtccaatcaaag 171




>42693_zma-MIR159d:mirbase
          Length = 217

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 cttggattgaagggagctcc 203
           ||||||||||||||||||||
Sbjct: 178 cttggattgaagggagctcc 197




>42692_zma-MIR159c:mirbase
          Length = 217

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 cttggattgaagggagctcc 203
           ||||||||||||||||||||
Sbjct: 178 cttggattgaagggagctcc 197




>42495_sbi-MIR159b:mirbase
          Length = 253

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 cttggattgaagggagctcc 203
           ||||||||||||||||||||
Sbjct: 214 cttggattgaagggagctcc 233




>42454_sof-MIR159c:mirbase
          Length = 238

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 cttggattgaagggagctcc 203
           ||||||||||||||||||||
Sbjct: 199 cttggattgaagggagctcc 218




>41528_sly-MIR159:mirbase
          Length = 177

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 179 catttcttggattgaagggagctc 202
           ||||| ||||||||||||||||||
Sbjct: 152 cattttttggattgaagggagctc 175




>39730_smo-MIR159:mirbase
          Length = 279

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 cttggattgaagggagctcc 203
           ||||||||||||||||||||
Sbjct: 249 cttggattgaagggagctcc 268




>39480_ppt-MIR319a:mirbase
          Length = 169

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   tggagctcccttcagtccaa 27
           ||||||||||||||||||||
Sbjct: 168 tggagctcccttcagtccaa 149




>39419_pta-MIR159c:mirbase
          Length = 85

 Score = 40.1 bits (20), Expect = 7e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 cttggattgaagggagctcc 203
           ||||||||||||||||||||
Sbjct: 49  cttggattgaagggagctcc 68