miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39417_pta-MIR159a:mirbase
          Length = 210

 Score =  408 bits (206), Expect = e-115
 Identities = 206/206 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gataagtggagctcccttcaatccaagaaatgcgtgtttagtgacagtacatctcctgcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gataagtggagctcccttcaatccaagaaatgcgtgtttagtgacagtacatctcctgcg 151

                                                                       
Query: 61  tcatgcacaccactatcctgtcatgcaggtcgattgattgatttgttcaggctgctggag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tcatgcacaccactatcctgtcatgcaggtcgattgattgatttgttcaggctgctggag 91

                                                                       
Query: 121 agtcacggacagggaagtagaatgcatgaatcagcagctgaaccaccgctgcacaagctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  agtcacggacagggaagtagaatgcatgaatcagcagctgaaccaccgctgcacaagctt 31

                                     
Query: 181 tggttggactgaagggagctccaaca 206
           ||||||||||||||||||||||||||
Sbjct: 30  tggttggactgaagggagctccaaca 5




>41302_ptc-MIR159d:mirbase
          Length = 194

 Score = 46.1 bits (23), Expect = 1e-05
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 8   ggagctcccttcaatccaagaaa 30
           |||||||||||||||||||||||
Sbjct: 184 ggagctcccttcaatccaagaaa 162




>41919_osa-MIR159c:mirbase
          Length = 197

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 6   gtggagctcccttcaatccaa 26
           |||||||||||||||||||||
Sbjct: 188 gtggagctcccttcaatccaa 168




>40703_mtr-MIR319:mirbase
          Length = 207

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 178 ctttggttggactgaagggagctcc 202
           ||||| |||||||||||||||||||
Sbjct: 163 ctttgcttggactgaagggagctcc 187




>40069_ath-MIR319a:mirbase
          Length = 176

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 178 ctttggttggactgaagggagctcc 202
           ||||| |||||||||||||||||||
Sbjct: 148 ctttgattggactgaagggagctcc 172




>39858_aly-MIR319a:mirbase
          Length = 221

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 178 ctttggttggactgaagggagctcc 202
           ||||| |||||||||||||||||||
Sbjct: 171 ctttgattggactgaagggagctcc 195




>42693_zma-MIR159d:mirbase
          Length = 217

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   ggagctcccttcaatccaag 27
           ||||||||||||||||||||
Sbjct: 197 ggagctcccttcaatccaag 178




>42692_zma-MIR159c:mirbase
          Length = 217

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   ggagctcccttcaatccaag 27
           ||||||||||||||||||||
Sbjct: 197 ggagctcccttcaatccaag 178




>42495_sbi-MIR159b:mirbase
          Length = 253

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   ggagctcccttcaatccaag 27
           ||||||||||||||||||||
Sbjct: 233 ggagctcccttcaatccaag 214




>42454_sof-MIR159c:mirbase
          Length = 238

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   ggagctcccttcaatccaag 27
           ||||||||||||||||||||
Sbjct: 218 ggagctcccttcaatccaag 199




>41528_sly-MIR159:mirbase
          Length = 177

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 9   gagctcccttcaatccaagaaatg 32
           |||||||||||||||||| |||||
Sbjct: 175 gagctcccttcaatccaaaaaatg 152




>39730_smo-MIR159:mirbase
          Length = 279

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 8   ggagctcccttcaatccaag 27
           ||||||||||||||||||||
Sbjct: 268 ggagctcccttcaatccaag 249




>39480_ppt-MIR319a:mirbase
          Length = 169

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 ttggactgaagggagctcca 203
           ||||||||||||||||||||
Sbjct: 149 ttggactgaagggagctcca 168




>39419_pta-MIR159c:mirbase
          Length = 85

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 8  ggagctcccttcaatccaag 27
          ||||||||||||||||||||
Sbjct: 68 ggagctcccttcaatccaag 49