miRNEST 2.0, an integrative microRNA resource :: BLAST
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 91.7 bits (46), Expect = 1e-19
Identities = 106/126 (84%)
Strand = Plus / Plus
Query: 6 gaaatcaatggggaatattggacctgcctggctccttgtatgccatctgcgaagcttgac 65
||||||||||||| | | ||| |||||||||||| ||||||||| |||||| ||| |
Sbjct: 6 gaaatcaatgggggaaactggcactgcctggctccctgtatgccacttgcgaattttggc 65
Query: 66 aaaactattgccagggtacatagctgccatgcagggagtcagacagaccgtacgtcttcc 125
|||||| || |||||||| |||||||||| |||||||||||||||||| | | ||||||
Sbjct: 66 aaaacttgtggcagggtacgtagctgccatacagggagtcagacagaccttgcatcttcc 125
Query: 126 cagatt 131
| ||||
Sbjct: 126 cggatt 131
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 75.8 bits (38), Expect = 8e-15
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 29 ctgcctggctccttgtatgccatctgcgaagcttgacaaaactattgccagggtacatag 88
|||||||||||| ||||||||| ||||| ||||| ||||| ||||||||| | |||||
Sbjct: 29 ctgcctggctccctgtatgccacctgcggggcttgtcaaaatgattgccaggctgcatag 88
Query: 89 ctgccatgcagggagtcagacagacc 114
||| ||| ||||||| ||||||||||
Sbjct: 89 ctggcatccagggagccagacagacc 114
>40660_mtr-MIR160c:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 1e-07
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 30 tgcctggctccttgtatgccatctgcgaagcttgacaaaactattg 75
||||||||||| || |||||||||| |||||||| |||||| ||||
Sbjct: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaaacgattg 51
>39462_ppt-MIR160h:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 31 gcctggctccttgtatgccatctgcgaagcttg 63
|||||||||||||||||||| ||| ||||||||
Sbjct: 30 gcctggctccttgtatgccaactgagaagcttg 62
>39375_pab-MIR160b:mirbase
Length = 116
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 29 ctgcctggctccttgtatgccatctgcg 56
|||||||||||| |||||||||||||||
Sbjct: 19 ctgcctggctccctgtatgccatctgcg 46
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 7e-06
Identities = 74/91 (81%)
Strand = Plus / Plus
Query: 24 tggacctgcctggctccttgtatgccatctgcgaagcttgacaaaactattgccagggta 83
|||| |||||||||||| ||||||||| ||||| ||||| |||| |||| | | |
Sbjct: 5 tggaactgcctggctccctgtatgccacctgcggggcttgccaaagtgattgtcgagctg 64
Query: 84 catagctgccatgcagggagtcagacagacc 114
|||||||| ||| ||||||| ||||||||||
Sbjct: 65 catagctggcatccagggagccagacagacc 95
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 29 ctgcctggctccttgtatgccatctg 54
|||||||||||| |||||||||||||
Sbjct: 10 ctgcctggctccctgtatgccatctg 35
>41735_bdi-MIR160e:mirbase
Length = 144
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 28 cctgcctggctccttgtatgccatctgcgaagc 60
||||||||||||| || |||||||||| |||||
Sbjct: 29 cctgcctggctccctgaatgccatctgagaagc 61
>41309_ptc-MIR160e:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 28 cctgcctggctccttgtatgccatctgcgaagcttgacaaa 68
||||||||||||| || ||||||||| |||||||| ||||
Sbjct: 9 cctgcctggctccctgaatgccatctaggaagcttgtcaaa 49
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 28 cctgcctggctccttgtatgccatctgcgaagc 60
||||||||||||| ||||||||| ||| |||||
Sbjct: 11 cctgcctggctccctgtatgccacctgagaagc 43
>41529_sly-MIR160a:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 30 tgcctggctccttgtatgccatctgcgaagct 61
||||||||||| |||||||||| ||| |||||
Sbjct: 20 tgcctggctccctgtatgccatttgcaaagct 51
>41310_ptc-MIR160f:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 29 ctgcctggctccttgtatgccatctgcgaagcttgacaaa 68
|||||||||||| || ||||||||| |||||||| ||||
Sbjct: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaa 49
>41087_tcc-MIR160a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 29 ctgcctggctccttgtatgccatctgcgaagcttgacaaa 68
|||||||||||| || ||||||||| |||||||| ||||
Sbjct: 20 ctgcctggctccctgaatgccatctaagaagcttgtcaaa 59
>40341_rco-MIR160c:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 29 ctgcctggctccttgtatgccatctgcgaagcttgacaaa 68
|||||||||||| || ||||||||| |||||||| ||||
Sbjct: 5 ctgcctggctccctgaatgccatctaagaagcttgtcaaa 44
