miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39508_ppt-MIR529f:mirbase
          Length = 122

 Score = 97.6 bits (49), Expect = 2e-21
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgggatcagaagagagagagcacagcccgatgtccaatgttcaggtcgaatgggctgtgc 89
           |||||||||||||||||||| ||||||| | | || |||||||| | ||| |||||||||
Sbjct: 23  tgggatcagaagagagagagtacagcccaacggccgatgttcagttggaacgggctgtgc 82

                                        
Query: 90  tctctctcttcttgctccaacttgggtgc 118
           |||||||||||||| |||||| |||||||
Sbjct: 83  tctctctcttcttgttccaacctgggtgc 111



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 37 agaagagagagagcacagcccg 58
          ||||||||||||||||||||||
Sbjct: 94 agaagagagagagcacagcccg 73




>39507_ppt-MIR529e:mirbase
          Length = 122

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 77  gaatgggctgtgctctctctcttcttgctccaac 110
           ||||||||||||||||||||||||| | ||||||
Sbjct: 70  gaatgggctgtgctctctctcttctggttccaac 103



 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 36 cagaagagagagagcacagccc 57
          ||||||||||||||||||||||
Sbjct: 95 cagaagagagagagcacagccc 74




>39504_ppt-MIR529b:mirbase
          Length = 149

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 38 gaagagagagagcacagcccg 58
          |||||||||||||||||||||
Sbjct: 31 gaagagagagagcacagcccg 51



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  gggctgtgctctctctcttc 100
           ||||||||||||||||||||
Sbjct: 50  gggctgtgctctctctcttc 31




>39503_ppt-MIR529a:mirbase
          Length = 149

 Score = 42.1 bits (21), Expect = 1e-04
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 37  agaagagagagagcacagcccgatg 61
           ||||||||||||| |||||||||||
Sbjct: 121 agaagagagagagaacagcccgatg 97



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  gggctgtgctctctctcttc 100
           ||||||||||||||||||||
Sbjct: 50  gggctgtgctctctctcttc 31



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 38 gaagagagagagcacagccc 57
          ||||||||||||||||||||
Sbjct: 31 gaagagagagagcacagccc 50




>41877_far-MIR529:mirbase
          Length = 120

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 36 cagaagagagagagcacagc 55
          ||||||||||||||||||||
Sbjct: 51 cagaagagagagagcacagc 70




>41867_far-MIR156b:mirbase
          Length = 180

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 36 cagaagagagagagcacagc 55
          ||||||||||||||||||||
Sbjct: 57 cagaagagagagagcacagc 76




>41866_far-MIR156a:mirbase
          Length = 180

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 36 cagaagagagagagcacagc 55
          ||||||||||||||||||||
Sbjct: 57 cagaagagagagagcacagc 76




>41726_bdi-MIR156:mirbase
          Length = 147

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 36  cagaagagagagagcacagc 55
           ||||||||||||||||||||
Sbjct: 104 cagaagagagagagcacagc 123




>40396_ahy-MIR156c:mirbase
          Length = 139

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 36 cagaagagagagagcacagcccga 59
          |||||||||||||||||| |||||
Sbjct: 25 cagaagagagagagcacaacccga 48




>40393_ahy-MIR156a:mirbase
          Length = 116

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 36 cagaagagagagagcacagcccga 59
          |||||||||||||||||| |||||
Sbjct: 21 cagaagagagagagcacaacccga 44




>39505_ppt-MIR529c:mirbase
          Length = 151

 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  gggctgtgctctctctcttc 100
           ||||||||||||||||||||
Sbjct: 50  gggctgtgctctctctcttc 31



 Score = 40.1 bits (20), Expect = 4e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 38 gaagagagagagcacagccc 57
          ||||||||||||||||||||
Sbjct: 31 gaagagagagagcacagccc 50