miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39511_ppt-MIR533b:mirbase
Length = 125
Score = 248 bits (125), Expect = 8e-67
Identities = 125/125 (100%)
Strand = Plus / Plus
Query: 1 ggaggaccgatatggagagctgtccaggctgtgaggggagcactcgtattcttttgacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaggaccgatatggagagctgtccaggctgtgaggggagcactcgtattcttttgacct 60
Query: 61 ttgctagaagagggaatacagcgctctccctcacagtctgtacagctctctgtatctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgctagaagagggaatacagcgctctccctcacagtctgtacagctctctgtatctctt 120
Query: 121 cctct 125
|||||
Sbjct: 121 cctct 125
>39513_ppt-MIR533c:mirbase
Length = 171
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 90 ctcacagtctgtacagctctctgtatctcttcc 122
||||||||||| |||||||||||||||||||||
Sbjct: 125 ctcacagtctgcacagctctctgtatctcttcc 157
>39515_ppt-MIR533e:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 86 ctccctcacagtctgtacagctctctgtatctcttcctct 125
||||||||||||||| | |||||| || |||||||||||
Sbjct: 99 ctccctcacagtctgcatggctctccgtgtctcttcctct 138
>39514_ppt-MIR533d:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 90 ctcacagtctgtacagctctctgt 113
||||||||||| ||||||||||||
Sbjct: 92 ctcacagtctgcacagctctctgt 115
