miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39543_ppt-MIR900:mirbase
Length = 220
Score = 436 bits (220), Expect = e-123
Identities = 220/220 (100%)
Strand = Plus / Plus
Query: 1 gagtaagatagagcaaaacgcagccaaagaagagtcgtccagtagccgacgtagatggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagtaagatagagcaaaacgcagccaaagaagagtcgtccagtagccgacgtagatggca 60
Query: 61 tgcaactccaacttcgcaatgatacccgctctaagatcgcggtcttcccaggtacaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcaactccaacttcgcaatgatacccgctctaagatcgcggtcttcccaggtacaagaa 120
Query: 121 cacagctcaccagtagtcgaccgctggtgagctgtgttcttgtacctgggaagaccacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacagctcaccagtagtcgaccgctggtgagctgtgttcttgtacctgggaagaccacca 180
Query: 181 gcgaagagaatagaatagaattggcgagttggaatccgaa 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcgaagagaatagaatagaattggcgagttggaatccgaa 220
Score = 119 bits (60), Expect = 9e-28
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 101 ggtcttcccaggtacaagaacacagctcaccagtagtcgaccgctggtgagctgtgttct 160
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 176 ggtcttcccaggtacaagaacacagctcaccagcggtcgactactggtgagctgtgttct 117
Query: 161 tgtacctgggaagacc 176
||||||||||||||||
Sbjct: 116 tgtacctgggaagacc 101
