miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39547_ppt-MIR902b:mirbase
Length = 223
Score = 442 bits (223), Expect = e-125
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 1 ggttgtgataaatcggttccgtgtcgtcataatcgcaagtgttgcaggcagttatgagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttgtgataaatcggttccgtgtcgtcataatcgcaagtgttgcaggcagttatgagga 60
Query: 61 gatggagagcgtgcagacttgtttccttcctctagcctatgatgcagattcttcatctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatggagagcgtgcagacttgtttccttcctctagcctatgatgcagattcttcatctgt 120
Query: 121 ttgttatcgttctcatggtgtacataacagacgaaggtctgcatcatagccaagaggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgttatcgttctcatggtgtacataacagacgaaggtctgcatcatagccaagaggaag 180
Query: 181 caaatcttaatacctggctcgaatttggcctgcacgcaatttt 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caaatcttaatacctggctcgaatttggcctgcacgcaatttt 223
>39554_ppt-MIR902e:mirbase
Length = 133
Score = 67.9 bits (34), Expect = 3e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 148 cagacgaaggtctgcatcatagccaagaggaagcaaat 185
|||||||||||||||||||||| |||||||||||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaat 118
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 82 tttccttcctctagcctatgatgcagattcttcatctgttt 122
||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 18 tttccttccgctagtctatgatgcagattcttcatctgttt 58
>39553_ppt-MIR902e:mirbase
Length = 133
Score = 67.9 bits (34), Expect = 3e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 148 cagacgaaggtctgcatcatagccaagaggaagcaaat 185
|||||||||||||||||||||| |||||||||||||||
Sbjct: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaat 118
Score = 65.9 bits (33), Expect = 1e-11
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 82 tttccttcctctagcctatgatgcagattcttcatctgttt 122
||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 18 tttccttccgctagtctatgatgcagattcttcatctgttt 58
>39546_ppt-MIR902a:mirbase
Length = 223
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 144 ataacagacgaaggtctgcatcatagccaag 174
|||||||||||||||||||||||||||||||
Sbjct: 144 ataacagacgaaggtctgcatcatagccaag 174
>39545_ppt-MIR902a:mirbase
Length = 223
Score = 61.9 bits (31), Expect = 2e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 144 ataacagacgaaggtctgcatcatagccaag 174
|||||||||||||||||||||||||||||||
Sbjct: 144 ataacagacgaaggtctgcatcatagccaag 174
>39558_ppt-MIR902g:mirbase
Length = 141
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 86 cttcctctagcctatgatgcagattcttcatctgttt 122
||||| |||| ||||||||||||||||||||||||||
Sbjct: 22 cttccgctagtctatgatgcagattcttcatctgttt 58
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 147 acagacgaaggtctgcatcatagccaagaggaa 179
||||||||||||||||||||||| |||||||||
Sbjct: 88 acagacgaaggtctgcatcatagtcaagaggaa 120
>39557_ppt-MIR902g:mirbase
Length = 141
Score = 58.0 bits (29), Expect = 3e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 86 cttcctctagcctatgatgcagattcttcatctgttt 122
||||| |||| ||||||||||||||||||||||||||
Sbjct: 22 cttccgctagtctatgatgcagattcttcatctgttt 58
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 147 acagacgaaggtctgcatcatagccaagaggaa 179
||||||||||||||||||||||| |||||||||
Sbjct: 88 acagacgaaggtctgcatcatagtcaagaggaa 120
>39550_ppt-MIR902c:mirbase
Length = 134
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 82 tttccttcctctagcctatgatgcagattcttcatctgtt 121
|||||| | |||||| ||||||||||||||||||||||||
Sbjct: 19 tttcctccttctagcgtatgatgcagattcttcatctgtt 58
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 148 cagacgaaggtctgcatcatagccaag 174
|||||||||||||||||||||| ||||
Sbjct: 82 cagacgaaggtctgcatcatagtcaag 108
>39549_ppt-MIR902c:mirbase
Length = 134
Score = 56.0 bits (28), Expect = 1e-08
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 82 tttccttcctctagcctatgatgcagattcttcatctgtt 121
|||||| | |||||| ||||||||||||||||||||||||
Sbjct: 19 tttcctccttctagcgtatgatgcagattcttcatctgtt 58
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 148 cagacgaaggtctgcatcatagccaag 174
|||||||||||||||||||||| ||||
Sbjct: 82 cagacgaaggtctgcatcatagtcaag 108
>39552_ppt-MIR902d:mirbase
Length = 129
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 148 cagacgaaggtctgcatcatagccaagaggaagcaaat 185
|||| ||||||||||||| ||||| |||||||||||||
Sbjct: 81 cagatgaaggtctgcatcgtagccgagaggaagcaaat 118
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tatgatgcagattcttcatct 118
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
>39551_ppt-MIR902d:mirbase
Length = 129
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 148 cagacgaaggtctgcatcatagccaagaggaagcaaat 185
|||| ||||||||||||| ||||| |||||||||||||
Sbjct: 81 cagatgaaggtctgcatcgtagccgagaggaagcaaat 118
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 tatgatgcagattcttcatct 118
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
>39556_ppt-MIR902f:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 144 ataacagacgaaggtctgcatcatagccaag 174
||||||||||||| ||||||||||| |||||
Sbjct: 71 ataacagacgaagatctgcatcataaccaag 101
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 98 tatgatgcagattcttcatctg 119
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39555_ppt-MIR902f:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 1e-05
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 144 ataacagacgaaggtctgcatcatagccaag 174
||||||||||||| ||||||||||| |||||
Sbjct: 71 ataacagacgaagatctgcatcataaccaag 101
Score = 44.1 bits (22), Expect = 5e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 98 tatgatgcagattcttcatctg 119
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
