miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39554_ppt-MIR902e:mirbase
Length = 133
Score = 264 bits (133), Expect = 1e-71
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 1 gacagcgtgccgtctcatttccttccgctagtctatgatgcagattcttcatctgtttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacagcgtgccgtctcatttccttccgctagtctatgatgcagattcttcatctgtttcg 60
Query: 61 tgtgatgcttgtgcacgagtcagacgaaggtctgcatcatagtcaagaggaagcaaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtgatgcttgtgcacgagtcagacgaaggtctgcatcatagtcaagaggaagcaaatat 120
Query: 121 gaaattcaggagc 133
|||||||||||||
Sbjct: 121 gaaattcaggagc 133
>39558_ppt-MIR902g:mirbase
Length = 141
Score = 79.8 bits (40), Expect = 5e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 15 tcatttccttccgctagtctatgatgcagattcttcatctgttt 58
|||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcattttcttccgctagtctatgatgcagattcttcatctgttt 58
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 81 cagacgaaggtctgcatcatagtcaagaggaa 112
||||||||||||||||||||||||||||||||
Sbjct: 89 cagacgaaggtctgcatcatagtcaagaggaa 120
>39557_ppt-MIR902g:mirbase
Length = 141
Score = 79.8 bits (40), Expect = 5e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 15 tcatttccttccgctagtctatgatgcagattcttcatctgttt 58
|||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 15 tcattttcttccgctagtctatgatgcagattcttcatctgttt 58
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 81 cagacgaaggtctgcatcatagtcaagaggaa 112
||||||||||||||||||||||||||||||||
Sbjct: 89 cagacgaaggtctgcatcatagtcaagaggaa 120
>39548_ppt-MIR902b:mirbase
Length = 223
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaat 118
|||||||||||||||||||||| |||||||||||||||
Sbjct: 148 cagacgaaggtctgcatcatagccaagaggaagcaaat 185
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 18 tttccttccgctagtctatgatgcagattcttcatctgttt 58
||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 82 tttccttcctctagcctatgatgcagattcttcatctgttt 122
>39547_ppt-MIR902b:mirbase
Length = 223
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaat 118
|||||||||||||||||||||| |||||||||||||||
Sbjct: 148 cagacgaaggtctgcatcatagccaagaggaagcaaat 185
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 18 tttccttccgctagtctatgatgcagattcttcatctgttt 58
||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 82 tttccttcctctagcctatgatgcagattcttcatctgttt 122
>39550_ppt-MIR902c:mirbase
Length = 134
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaatat 120
||||||||||||||||||||||||||| || || ||||||
Sbjct: 82 cagacgaaggtctgcatcatagtcaagggggaggaaatat 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatctgtt 57
||||||||||||||||||||||||
Sbjct: 35 tatgatgcagattcttcatctgtt 58
>39549_ppt-MIR902c:mirbase
Length = 134
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaatat 120
||||||||||||||||||||||||||| || || ||||||
Sbjct: 82 cagacgaaggtctgcatcatagtcaagggggaggaaatat 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatctgtt 57
||||||||||||||||||||||||
Sbjct: 35 tatgatgcagattcttcatctgtt 58
>39546_ppt-MIR902a:mirbase
Length = 223
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 cagacgaaggtctgcatcatagtcaag 107
|||||||||||||||||||||| ||||
Sbjct: 148 cagacgaaggtctgcatcatagccaag 174
>39545_ppt-MIR902a:mirbase
Length = 223
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 81 cagacgaaggtctgcatcatagtcaag 107
|||||||||||||||||||||| ||||
Sbjct: 148 cagacgaaggtctgcatcatagccaag 174
>39556_ppt-MIR902f:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatctg 55
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39555_ppt-MIR902f:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatctg 55
||||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatctg 51
>39552_ppt-MIR902d:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaat 118
|||| ||||||||||||| ||| | |||||||||||||
Sbjct: 81 cagatgaaggtctgcatcgtagccgagaggaagcaaat 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatct 54
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
>39551_ppt-MIR902d:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 81 cagacgaaggtctgcatcatagtcaagaggaagcaaat 118
|||| ||||||||||||| ||| | |||||||||||||
Sbjct: 81 cagatgaaggtctgcatcgtagccgagaggaagcaaat 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 34 tatgatgcagattcttcatct 54
|||||||||||||||||||||
Sbjct: 30 tatgatgcagattcttcatct 50
