miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39560_ppt-MIR902h:mirbase
          Length = 128

 Score =  254 bits (128), Expect = 1e-68
 Identities = 128/128 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctgcacaacccacaaaatcgtgttgatctagattatgatgtagattcttcatctggaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cctgcacaacccacaaaatcgtgttgatctagattatgatgtagattcttcatctggaat 60

                                                                       
Query: 61  tgaatttcgatttaagaagaagggtctacatcataaactggatgattacgattgttggat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgaatttcgatttaagaagaagggtctacatcataaactggatgattacgattgttggat 120

                   
Query: 121 aacagcag 128
           ||||||||
Sbjct: 121 aacagcag 128




>39562_ppt-MIR902i:mirbase
          Length = 120

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 21 gtgttgatctagattatgatgtagattcttcatct 55
          |||||||||| ||||||||||||||||||||||||
Sbjct: 17 gtgttgatctggattatgatgtagattcttcatct 51




>39561_ppt-MIR902i:mirbase
          Length = 120

 Score = 61.9 bits (31), Expect = 1e-10
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                             
Query: 21 gtgttgatctagattatgatgtagattcttcatct 55
          |||||||||| ||||||||||||||||||||||||
Sbjct: 17 gtgttgatctggattatgatgtagattcttcatct 51