miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39563_ppt-MIR902j:mirbase
Length = 173
Score = 343 bits (173), Expect = 3e-95
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 1 gcgggttaaagttgaacaggttgcctctctcgtatatgttgcagattcttcatttgtcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgggttaaagttgaacaggttgcctctctcgtatatgttgcagattcttcatttgtcta 60
Query: 61 gctgatcaactatagtattgatttgtctagctgatcaactatagtattgactgtcatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gctgatcaactatagtattgatttgtctagctgatcaactatagtattgactgtcatgca 120
Query: 121 aaagaaggatctgcaacatagacaagaataggtgatcgatttttatacactca 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaagaaggatctgcaacatagacaagaataggtgatcgatttttatacactca 173
>39568_ppt-MIR902l:mirbase
Length = 134
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 25 ctctctcgtatatgttgcagattcttcatttg 56
||||||||| ||||||||||||||||||||||
Sbjct: 25 ctctctcgtctatgttgcagattcttcatttg 56
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 121 aaagaaggatctgcaacatagacaagaa 148
|||||||||||||||||||| |||||||
Sbjct: 82 aaagaaggatctgcaacatatacaagaa 109
>39567_ppt-MIR902l:mirbase
Length = 134
Score = 56.0 bits (28), Expect = 9e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 25 ctctctcgtatatgttgcagattcttcatttg 56
||||||||| ||||||||||||||||||||||
Sbjct: 25 ctctctcgtctatgttgcagattcttcatttg 56
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 121 aaagaaggatctgcaacatagacaagaa 148
|||||||||||||||||||| |||||||
Sbjct: 82 aaagaaggatctgcaacatatacaagaa 109
>39566_ppt-MIR902k:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 35 tatgttgcagattcttcatttg 56
||||||||||||||||||||||
Sbjct: 34 tatgttgcagattcttcatttg 55
>39565_ppt-MIR902k:mirbase
Length = 142
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 35 tatgttgcagattcttcatttg 56
||||||||||||||||||||||
Sbjct: 34 tatgttgcagattcttcatttg 55
