miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>39565_ppt-MIR902k:mirbase
          Length = 142

 Score =  281 bits (142), Expect = 7e-77
 Identities = 142/142 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttgattttgctgcatagattatctttctattctatgttgcagattcttcatttgccgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gttgattttgctgcatagattatctttctattctatgttgcagattcttcatttgccgct 60

                                                                       
Query: 61  ctgctgaatgatcatattgcgggtgaagcaaacgaaggatctgcaatataaaccagaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctgctgaatgatcatattgcgggtgaagcaaacgaaggatctgcaatataaaccagaaaa 120

                                 
Query: 121 ggtaatcgtattttggccaata 142
           ||||||||||||||||||||||
Sbjct: 121 ggtaatcgtattttggccaata 142




>39568_ppt-MIR902l:mirbase
          Length = 134

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 32 tctatgttgcagattcttcatttgc 56
          |||||||||||||||||||||||||
Sbjct: 33 tctatgttgcagattcttcatttgc 57




>39567_ppt-MIR902l:mirbase
          Length = 134

 Score = 50.1 bits (25), Expect = 4e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 32 tctatgttgcagattcttcatttgc 56
          |||||||||||||||||||||||||
Sbjct: 33 tctatgttgcagattcttcatttgc 57




>39564_ppt-MIR902j:mirbase
          Length = 173

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 34 tatgttgcagattcttcatttg 55
          ||||||||||||||||||||||
Sbjct: 35 tatgttgcagattcttcatttg 56




>39563_ppt-MIR902j:mirbase
          Length = 173

 Score = 44.1 bits (22), Expect = 3e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 34 tatgttgcagattcttcatttg 55
          ||||||||||||||||||||||
Sbjct: 35 tatgttgcagattcttcatttg 56