miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39568_ppt-MIR902l:mirbase
Length = 134
Score = 266 bits (134), Expect = 4e-72
Identities = 134/134 (100%)
Strand = Plus / Plus
Query: 1 attagcaactgctgcactggttatctctctcgtctatgttgcagattcttcatttgcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attagcaactgctgcactggttatctctctcgtctatgttgcagattcttcatttgcaaa 60
Query: 61 actgatcatagaagttaagtgaaagaaggatctgcaacatatacaagaacggataatcgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgatcatagaagttaagtgaaagaaggatctgcaacatatacaagaacggataatcgg 120
Query: 121 atgtgatgatgagc 134
||||||||||||||
Sbjct: 121 atgtgatgatgagc 134
>39564_ppt-MIR902j:mirbase
Length = 173
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 25 ctctctcgtctatgttgcagattcttcatttg 56
||||||||| ||||||||||||||||||||||
Sbjct: 25 ctctctcgtatatgttgcagattcttcatttg 56
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 aaagaaggatctgcaacatatacaagaa 109
|||||||||||||||||||| |||||||
Sbjct: 121 aaagaaggatctgcaacatagacaagaa 148
>39563_ppt-MIR902j:mirbase
Length = 173
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 25 ctctctcgtctatgttgcagattcttcatttg 56
||||||||| ||||||||||||||||||||||
Sbjct: 25 ctctctcgtatatgttgcagattcttcatttg 56
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 82 aaagaaggatctgcaacatatacaagaa 109
|||||||||||||||||||| |||||||
Sbjct: 121 aaagaaggatctgcaacatagacaagaa 148
>39566_ppt-MIR902k:mirbase
Length = 142
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 33 tctatgttgcagattcttcatttgc 57
|||||||||||||||||||||||||
Sbjct: 32 tctatgttgcagattcttcatttgc 56
>39565_ppt-MIR902k:mirbase
Length = 142
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 33 tctatgttgcagattcttcatttgc 57
|||||||||||||||||||||||||
Sbjct: 32 tctatgttgcagattcttcatttgc 56
