miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39575_ppt-MIR1023b:mirbase
Length = 172
Score = 341 bits (172), Expect = 1e-94
Identities = 172/172 (100%)
Strand = Plus / Plus
Query: 1 gaagcgcggcgggccagcttgcaatttcatgacacactctctccatttctctgcctgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagcgcggcgggccagcttgcaatttcatgacacactctctccatttctctgcctgtca 60
Query: 61 tgacttggttgatcgatggagcggtggttttcattgcccgattgaggatcaggagttggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgacttggttgatcgatggagcggtggttttcattgcccgattgaggatcaggagttggg 120
Query: 121 gagagaattgaagagagtgcattgtgaattgcaagctcctcctttcttttcg 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagagaattgaagagagtgcattgtgaattgcaagctcctcctttcttttcg 172
>39573_ppt-MIR1023a:mirbase
Length = 170
Score = 56.0 bits (28), Expect = 9e-09
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 109 tcaggagttggggagagaattgaagagagtgcattgtgaattgc 152
||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 108 tcaggagttgga-agagaattggagagagtgcattgtgaattgc 150
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 18 cttgcaatttcatgacacactctctccatttctct 52
|||||| ||||||| ||||||||||||||||||||
Sbjct: 18 cttgcagtttcatggcacactctctccatttctct 52
>39572_ppt-MIR1023a:mirbase
Length = 170
Score = 56.0 bits (28), Expect = 9e-09
Identities = 41/44 (93%), Gaps = 1/44 (2%)
Strand = Plus / Plus
Query: 109 tcaggagttggggagagaattgaagagagtgcattgtgaattgc 152
||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 108 tcaggagttgga-agagaattggagagagtgcattgtgaattgc 150
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 18 cttgcaatttcatgacacactctctccatttctct 52
|||||| ||||||| ||||||||||||||||||||
Sbjct: 18 cttgcagtttcatggcacactctctccatttctct 52
