miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39576_ppt-MIR1023c:mirbase
Length = 168
Score = 333 bits (168), Expect = 2e-92
Identities = 168/168 (100%)
Strand = Plus / Plus
Query: 1 gcgcagttacacagcttgcatttcggtgtccactctctccgtttcccttcccatgatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgcagttacacagcttgcatttcggtgtccactctctccgtttcccttcccatgatggc 60
Query: 61 tagccttgagtaagtacatatgttttgaacacatgtatgcttgcttaaaatcctttgtcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagccttgagtaagtacatatgttttgaacacatgtatgcttgcttaaaatcctttgtcg 120
Query: 121 gagggaatcggaaagagtgtacaatgaattgcaagcttgattgattcg 168
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagggaatcggaaagagtgtacaatgaattgcaagcttgattgattcg 168
>39578_ppt-MIR1023d:mirbase
Length = 141
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tccactctctccgtttcccttccca 53
|||||||||||||||||||||||||
Sbjct: 29 tccactctctccgtttcccttccca 53
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 134 agagtgtacaatgaattgcaagcttgattg 163
|||||||| ||||||||||| |||||||||
Sbjct: 107 agagtgtataatgaattgcatgcttgattg 136
>39580_ppt-MIR1023e:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 cactctctccgtttcccttcc 51
|||||||||||||||||||||
Sbjct: 22 cactctctccgtttcccttcc 42
>39579_ppt-MIR1023e:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 31 cactctctccgtttcccttcc 51
|||||||||||||||||||||
Sbjct: 22 cactctctccgtttcccttcc 42
