miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39577_ppt-MIR1023c:mirbase
Length = 168
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tccactctctccgtttcccttccca 53
|||||||||||||||||||||||||
Sbjct: 29 tccactctctccgtttcccttccca 53
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 107 agagtgtataatgaattgcatgcttgattg 136
|||||||| ||||||||||| |||||||||
Sbjct: 134 agagtgtacaatgaattgcaagcttgattg 163
>39576_ppt-MIR1023c:mirbase
Length = 168
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 29 tccactctctccgtttcccttccca 53
|||||||||||||||||||||||||
Sbjct: 29 tccactctctccgtttcccttccca 53
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 107 agagtgtataatgaattgcatgcttgattg 136
|||||||| ||||||||||| |||||||||
Sbjct: 134 agagtgtacaatgaattgcaagcttgattg 163
>39580_ppt-MIR1023e:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 atcatccactctctccgtttcccttcc 51
||||| |||||||||||||||||||||
Sbjct: 16 atcatacactctctccgtttcccttcc 42
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 92 ggaagggaaatggagagagtgtataatga 120
|||||||||| ||||||||||||| ||||
Sbjct: 42 ggaagggaaacggagagagtgtatgatga 14
>39579_ppt-MIR1023e:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 25 atcatccactctctccgtttcccttcc 51
||||| |||||||||||||||||||||
Sbjct: 16 atcatacactctctccgtttcccttcc 42
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 92 ggaagggaaatggagagagtgtataatga 120
|||||||||| ||||||||||||| ||||
Sbjct: 42 ggaagggaaacggagagagtgtatgatga 14
