miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39579_ppt-MIR1023e:mirbase
Length = 120
Score = 238 bits (120), Expect = 8e-64
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 1 acagctttgaatgtcatcatacactctctccgtttcccttccgaatcgtttttcccctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acagctttgaatgtcatcatacactctctccgtttcccttccgaatcgtttttcccctca 60
Query: 61 tgcactggaaactgttggaagggaatcgggtggagtgcatcatgatctgcaagctccgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcactggaaactgttggaagggaatcgggtggagtgcatcatgatctgcaagctccgac 120
>39578_ppt-MIR1023d:mirbase
Length = 141
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 atcatacactctctccgtttcccttcc 42
||||| |||||||||||||||||||||
Sbjct: 25 atcatccactctctccgtttcccttcc 51
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 14 tcatcatacactctctccgtttcccttcc 42
|||| ||||||||||||| ||||||||||
Sbjct: 120 tcattatacactctctccatttcccttcc 92
>39577_ppt-MIR1023c:mirbase
Length = 168
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 cactctctccgtttcccttcc 42
|||||||||||||||||||||
Sbjct: 31 cactctctccgtttcccttcc 51
>39576_ppt-MIR1023c:mirbase
Length = 168
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 cactctctccgtttcccttcc 42
|||||||||||||||||||||
Sbjct: 31 cactctctccgtttcccttcc 51
