miRNEST 2.0, an integrative microRNA resource :: BLAST
>42044_osa-MIR399d:mirbase
Length = 286
Score = 567 bits (286), Expect = e-162
Identities = 286/286 (100%)
Strand = Plus / Minus
Query: 29 aagacagtcgcagggcaactctcctttggcaggccgttttggtgaattcaatcgctacat 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aagacagtcgcagggcaactctcctttggcaggccgttttggtgaattcaatcgctacat 227
Query: 89 ggcgatcgatcaaagctagtagcagctggtatatacatacatgcacataaccaaccgata 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ggcgatcgatcaaagctagtagcagctggtatatacatacatgcacataaccaaccgata 167
Query: 149 tatgatggtctatcaaaggccaccatgtatatatatacacaatgcaatcacatatggatg 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tatgatggtctatcaaaggccaccatgtatatatatacacaatgcaatcacatatggatg 107
Query: 209 attgcaatgtagcaccatggccggactgtatataccttggatgcatatacaattacaaaa 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 attgcaatgtagcaccatggccggactgtatataccttggatgcatatacaattacaaaa 47
Query: 269 tcacctagaatgcacctgccagaggagagctgcctactactgtctt 314
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 tcacctagaatgcacctgccagaggagagctgcctactactgtctt 1
>42592_sbi-MIR399d:mirbase
Length = 205
Score = 63.9 bits (32), Expect = 8e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 30 agacagtcgcagggcaactctcctttggcagg 61
||||||||||||||||||||||||||||||||
Sbjct: 195 agacagtcgcagggcaactctcctttggcagg 164
Score = 60.0 bits (30), Expect = 1e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 283 cctgccagaggagagctgcctactactgtcttca 316
||||||||||||||||||||||| ||||||||||
Sbjct: 42 cctgccagaggagagctgcctacaactgtcttca 9
>42828_zma-MIR399j:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 5e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 38 gcagggcaactctcctttggcagg 61
||||||||||||||||||||||||
Sbjct: 175 gcagggcaactctcctttggcagg 152
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 283 cctgccagaggagagctgcct 303
|||||||||||||||||||||
Sbjct: 21 cctgccagaggagagctgcct 1
>41669_vvi-MIR399b:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 2e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 33 cagtcgcagggcaactctcctttggca 59
||||| |||||||||||||||||||||
Sbjct: 113 cagtcacagggcaactctcctttggca 87
>41249_csi-MIR399d:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 2e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 33 cagtcgcagggcaactctcctttggca 59
||||| |||||||||||||||||||||
Sbjct: 126 cagtcacagggcaactctcctttggca 100
>40093_ath-MIR399b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggcagg 61
|||||||||||||||||||||||
Sbjct: 125 cagggcaactctcctttggcagg 103
>39885_aly-MIR399b:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 2e-05
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggcagg 61
|||||||||||||||||||||||
Sbjct: 126 cagggcaactctcctttggcagg 104
>42827_zma-MIR399i:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 38 gcagggcaactctcctttggca 59
||||||||||||||||||||||
Sbjct: 91 gcagggcaactctcctttggca 70
>42823_zma-MIR399e:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggcag 60
||||||||||||||||||||||
Sbjct: 105 cagggcaactctcctttggcag 84
>42597_sbi-MIR399i:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggcag 60
||||||||||||||||||||||
Sbjct: 102 cagggcaactctcctttggcag 81
>41670_vvi-MIR399c:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggcag 60
||||||||||||||||||||||
Sbjct: 72 cagggcaactctcctttggcag 51
>41247_csi-MIR399b:mirbase
Length = 168
Score = 44.1 bits (22), Expect = 7e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 40 agggcaactctcctttggcagg 61
||||||||||||||||||||||
Sbjct: 144 agggcaactctcctttggcagg 123
>40383_rco-MIR399a:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 7e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 34 agtcgcagggcaactctcctttggca 59
|||| |||||||||||||||||||||
Sbjct: 93 agtcacagggcaactctcctttggca 68
>42050_osa-MIR399j:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 40 agggcaactctcctttggcag 60
|||||||||||||||||||||
Sbjct: 95 agggcaactctcctttggcag 75
>41676_vvi-MIR399i:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 3e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 34 agtcgcagggcaactctcctttggc 58
|||| ||||||||||||||||||||
Sbjct: 117 agtcacagggcaactctcctttggc 93
>41192_aqc-MIR399:mirbase
Length = 98
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 40 agggcaactctcctttggcag 60
|||||||||||||||||||||
Sbjct: 91 agggcaactctcctttggcag 71
>41154_tcc-MIR399i:mirbase
Length = 157
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggca 59
|||||||||||||||||||||
Sbjct: 137 cagggcaactctcctttggca 117
>41027_pvu-MIR399a:mirbase
Length = 223
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggca 59
|||||||||||||||||||||
Sbjct: 109 cagggcaactctcctttggca 89
>40746_mtr-MIR399p:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggca 59
|||||||||||||||||||||
Sbjct: 74 cagggcaactctcctttggca 54
>40742_mtr-MIR399l:mirbase
Length = 79
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggca 59
|||||||||||||||||||||
Sbjct: 74 cagggcaactctcctttggca 54
>40094_ath-MIR399c:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggca 59
|||||||||||||||||||||
Sbjct: 104 cagggcaactctcctttggca 84
>39886_aly-MIR399c:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 3e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 39 cagggcaactctcctttggca 59
|||||||||||||||||||||
Sbjct: 109 cagggcaactctcctttggca 89
