miRNEST 2.0, an integrative microRNA resource :: BLAST
>40118_ath-MIR447a:mirbase
Length = 237
Score = 428 bits (216), Expect = e-121
Identities = 230/237 (97%)
Strand = Plus / Plus
Query: 1 cattcttaatatataatactactttttcatccattaaaccccttacaatgtcgagtaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cattcttaatatataatactactttttcatccattaaaccccttacaatgtcgagtaaac 60
Query: 61 gaagcatctgtcccctggtattgtcttcgagcttggtgnnnnnnnctagccaactccaag 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 gaagcatctgtcccctggtattgtcttcgagcttggtgtttttttctagccaactccaag 120
Query: 121 ttctcgagttgatcattgtttgtattcttgagacattatttggggacgagatgttttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttctcgagttgatcattgtttgtattcttgagacattatttggggacgagatgttttgtt 180
Query: 181 gactcgatataagaaggggctttatggaagaaattgtagtattatatatcgagagtg 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gactcgatataagaaggggctttatggaagaaattgtagtattatatatcgagagtg 237
>40120_ath-MIR447b:mirbase
Length = 236
Score = 359 bits (181), Expect = e-100
Identities = 220/234 (94%), Gaps = 1/234 (0%)
Strand = Plus / Plus
Query: 1 cattcttaatatataatactactttttcatccattaaaccccttacaatgtcgagtaaac 60
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 cattcttaatatacaatactactttttcatccattaatccccttacaatgtcgagtaaac 60
Query: 61 gaagcatctgtcccctggtattgtcttcgagcttggtgnnnnnnnctagccaactccaag 120
|||||||||||||||||||||||||||||||||||||| ||||||| | |||||
Sbjct: 61 gaagcatctgtcccctggtattgtcttcgagcttggtgtgtttttctagccagccccaag 120
Query: 121 ttctcgagttgatcattgtttgtattcttgagacattatttggggacgagatgttttgtt 180
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 121 ttctcgagttgatcattgtttgtattc-tgacacattatttggggacgagatgttttgtt 179
Query: 181 gactcgatataagaaggggctttatggaagaaattgtagtattatatatcgaga 234
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 180 gactcgatataagaaggggctttatggaagaaattgtagtattatatattgaga 233
Score = 40.1 bits (20), Expect = 8e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 1 cattcttaatatataatactactttttcatccattaaacccctt 44
|||||| ||||||||||||||| |||| ||||| || ||||||
Sbjct: 236 cattctcaatatataatactacaatttcttccataaagcccctt 193
>40122_ath-MIR447c:mirbase
Length = 198
Score = 121 bits (61), Expect = 3e-28
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 1 cattcttaatatataatactactttttcatccattaaaccccttacaatgtcgagtaaac 60
||||||||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||
Sbjct: 1 cattcttaatatacaatacttctttttcatgcattaagccccttacaatgtcgagtaaac 60
Query: 61 gaagcatctgtcccctggtattgtcttcgagcttggt 97
|||||| ||||| || |||||||||||||||||||
Sbjct: 61 aaagcatgtgtccgctaatattgtcttcgagcttggt 97
Score = 115 bits (58), Expect = 2e-26
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 157 tatttggggacgagatgttttgttgactcgatataagaaggggctttatggaagaaattg 216
||||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 118 tatttggggacgacatcttttgttgactcgatataagaagggggtttgtggaagaaattg 177
Query: 217 tagtattatatatc 230
||||||||||||||
Sbjct: 178 tagtattatatatc 191
>40121_ath-MIR447c:mirbase
Length = 198
Score = 121 bits (61), Expect = 3e-28
Identities = 88/97 (90%)
Strand = Plus / Plus
Query: 1 cattcttaatatataatactactttttcatccattaaaccccttacaatgtcgagtaaac 60
||||||||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||
Sbjct: 1 cattcttaatatacaatacttctttttcatgcattaagccccttacaatgtcgagtaaac 60
Query: 61 gaagcatctgtcccctggtattgtcttcgagcttggt 97
|||||| ||||| || |||||||||||||||||||
Sbjct: 61 aaagcatgtgtccgctaatattgtcttcgagcttggt 97
Score = 115 bits (58), Expect = 2e-26
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 157 tatttggggacgagatgttttgttgactcgatataagaaggggctttatggaagaaattg 216
||||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 118 tatttggggacgacatcttttgttgactcgatataagaagggggtttgtggaagaaattg 177
Query: 217 tagtattatatatc 230
||||||||||||||
Sbjct: 178 tagtattatatatc 191
