miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39909_aly-MIR827:mirbase
          Length = 197

 Score =  182 bits (92), Expect = 6e-47
 Identities = 141/156 (90%), Gaps = 6/156 (3%)
 Strand = Plus / Plus

                                                                       
Query: 28  tttctctcttgcaacccttgaatgtgtttgttgattgatatctacacatgttgatcatcc 87
           |||||||||||||||||||||||||||||||||||||| ||||| |||| | ||| ||||
Sbjct: 36  tttctctcttgcaacccttgaatgtgtttgttgattgacatctatacatatcgataatcc 95

                                                                       
Query: 88  tt--gtgttgat----cgattggtttagatgaccatcaacaaactctttcgtggttttgc 141
           |   ||||||||    |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 96  tatcgtgttgatagatcgattggtttagatgaccatcaacaaacgctttcgtggttttgc 155

                                               
Query: 142 atcgcttcttggaatctcgatcatgtttttagcatc 177
           ||||||||||| ||||| ||||||||||||||||||
Sbjct: 156 atcgcttcttgaaatcttgatcatgtttttagcatc 191




>41160_tcc-MIR827:mirbase
          Length = 148

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 106 ttagatgaccatcaacaaactctttcgtggttttgcat 143
           |||||||||||||||||||| ||||| | |||||||||
Sbjct: 108 ttagatgaccatcaacaaacactttcatcgttttgcat 145




>41069_ghr-MIR827c:mirbase
          Length = 155

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 104 gtttagatgaccatcaacaaac 125
           ||||||||||||||||||||||
Sbjct: 116 gtttagatgaccatcaacaaac 137




>41068_ghr-MIR827b:mirbase
          Length = 192

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 104 gtttagatgaccatcaacaaac 125
           ||||||||||||||||||||||
Sbjct: 134 gtttagatgaccatcaacaaac 155




>41067_ghr-MIR827a:mirbase
          Length = 155

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 104 gtttagatgaccatcaacaaac 125
           ||||||||||||||||||||||
Sbjct: 116 gtttagatgaccatcaacaaac 137




>41265_csi-MIR827:mirbase
          Length = 100

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 ttagatgaccatcaacaaac 125
           ||||||||||||||||||||
Sbjct: 61  ttagatgaccatcaacaaac 80