miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>39910_aly-MIR828:mirbase
          Length = 199

 Score =  226 bits (114), Expect = 5e-60
 Identities = 178/195 (91%), Gaps = 7/195 (3%)
 Strand = Plus / Plus

                                                                       
Query: 3   gacaaagtcacaaaagtgataaactctcctttccactttctaatgtttcttgcttaaatg 62
           ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 5   gacaaagtcacaaaagtgataaaatctcctt-ccactttctaatgtttcttgcttaaatg 63

                                                                       
Query: 63  agtattccatgtaaaaa-tgattcactcactcgtatgggtgggttgggtt----ttctct 117
           ||||||||||||||||| ||| |||||||||| |||||||||||||||||    ||||||
Sbjct: 64  agtattccatgtaaaaaatgagtcactcactcatatgggtgggttgggttggttttctct 123

                                                                       
Query: 118 tcatgagatgctcatttgagcaagcaatgtttggaagtgggactatttaatatcatg-ta 176
           |||||||||||||||||||||||||||||| ||  ||||| |||||||| ||||||| ||
Sbjct: 124 tcatgagatgctcatttgagcaagcaatgtctgtgagtggaactatttagtatcatgtta 183

                          
Query: 177 tgagttttatctttt 191
           ||| |||| ||||||
Sbjct: 184 tgaattttgtctttt 198




>41691_vvi-MIR828a:mirbase
          Length = 122

 Score = 42.1 bits (21), Expect = 2e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 47 gtttcttgcttaaatgagtattcca 71
          |||||||||| ||||||||||||||
Sbjct: 7  gtttcttgctcaaatgagtattcca 31



 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 121 tgagatgctcatttgagcaagcaa 144
           ||||||||||||||||| ||||||
Sbjct: 88  tgagatgctcatttgaggaagcaa 111