miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40147_ath-MIR829:mirbase
Length = 205
Score = 406 bits (205), Expect = e-114
Identities = 205/205 (100%)
Strand = Plus / Plus
Query: 1 acgtcaaaattgattaacaaaaagtcaatgaatcattctaccaattgacttgtactttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgtcaaaattgattaacaaaaagtcaatgaatcattctaccaattgacttgtactttga 60
Query: 61 agctttgatttgaacctgtcaattggtatcaaagcttctaaatctttgaagctctgatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agctttgatttgaacctgtcaattggtatcaaagcttctaaatctttgaagctctgatac 120
Query: 121 caaatgatggaatcaaattaaagcttcaaggtagtagtcatcttggcagagaaaagaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaatgatggaatcaaattaaagcttcaaggtagtagtcatcttggcagagaaaagaaaa 180
Query: 181 agcacttcgagtttaccatcttgat 205
|||||||||||||||||||||||||
Sbjct: 181 agcacttcgagtttaccatcttgat 205
>39911_aly-MIR829:mirbase
Length = 180
Score = 210 bits (106), Expect = 3e-55
Identities = 151/165 (91%), Gaps = 2/165 (1%)
Strand = Plus / Plus
Query: 11 tgattaacaaaaagtcaatgaatcattctaccaattgacttgtactttgaagctttgatt 70
||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1 tgattaacaaaaa--caatgaatcattctaccaattgacttgtactttgaatctttgatt 58
Query: 71 tgaacctgtcaattggtatcaaagcttctaaatctttgaagctctgataccaaatgatgg 130
||||||| |||| ||||||||||||||||| ||||||||||||||||||||| ||| ||
Sbjct: 59 tgaacctttcaaatggtatcaaagcttctacatctttgaagctctgataccatgtgaagg 118
Query: 131 aatcaaattaaagcttcaaggtagtagtcatcttggcagagaaaa 175
| |||||| ||| |||||||||| |||||| ||||||||||||||
Sbjct: 119 agtcaaatcaaatcttcaaggtactagtcaacttggcagagaaaa 163
