miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>40152_ath-MIR832:mirbase
          Length = 333

 Score =  607 bits (306), Expect = e-174
 Identities = 324/333 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagaaagaaaaaataagtgacaagtaacaaacatgagaaaggtgaaacttgctgggatcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aagaaagaaaaaataagtgacaagtaacaaacatgagaaaggtgaaacttgctgggatcg 60

                                                                       
Query: 61  ggaatcgaaagatccgaaagccagtctttagaggattctgaacgggctagtgaaagtaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggaatcgaaagatccgaaagccagtctttagaggattctgaacgggctagtgaaagtaaa 120

                                                                       
Query: 121 cttgtgatgtgaccatattgtgcaatatgaatgtaagttggtggtgtggtcatctcacaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttgtgatgtgaccatattgtgcaatatgaatgtaagttggtggtgtggtcatctcacaa 180

                                                                       
Query: 181 ggtggctaagtcatctcacttattttcttaacgaaagcatcagcccgtttagcatcatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtggctaagtcatctcacttattttcttaacgaaagcatcagcccgtttagcatcatct 240

                                                                       
Query: 241 tcttgaagcttgcctttcgcatcttttgattcccaatccaagcaaggttcaccnnnnnnn 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||       
Sbjct: 241 tcttgaagcttgcctttcgcatcttttgattcccaatccaagcaaggttcaccttttttt 300

                                            
Query: 301 nngccatgacctttacaaaatatccaaattttg 333
             |||||||||||||||||||||||||||||||
Sbjct: 301 ttgccatgacctttacaaaatatccaaattttg 333