miRNEST 2.0, an integrative microRNA resource :: BLAST
>40311_bra-MIR159a:mirbase
Length = 185
Score = 363 bits (183), Expect = e-101
Identities = 183/183 (100%)
Strand = Plus / Plus
Query: 1 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 62
Query: 61 gaatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gaatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatc 122
Query: 121 tcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 182
Query: 181 aca 183
|||
Sbjct: 183 aca 185
>39804_aly-MIR159a:mirbase
Length = 222
Score = 270 bits (136), Expect = 3e-73
Identities = 174/186 (93%), Gaps = 3/186 (1%)
Strand = Plus / Plus
Query: 1 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 60
|||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 20 gtagagctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctat 79
Query: 61 gaatcccataagccctaatccttata---tataaaaaggatttggttatatggcttacat 117
| |||||||||||||||||||||||| | |||||||||||||||||||||||| |||
Sbjct: 80 ggatcccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttgcat 139
Query: 118 atctcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagc 177
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 140 atctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagc 199
Query: 178 tctaca 183
||||||
Sbjct: 200 tctaca 205
>40016_ath-MIR159a:mirbase
Length = 184
Score = 248 bits (125), Expect = 1e-66
Identities = 170/184 (92%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 1 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 60
|||| |||||||| ||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 1 gtagagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctat 60
Query: 61 gaatcccataagccctaatccttatatat--aaaaaggatttggttatatggcttacata 118
| ||||||||||||||||||||| || | ||||||||||||||||||||| || ||||
Sbjct: 61 ggatcccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcata 120
Query: 119 tctcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagct 178
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 180
Query: 179 ctac 182
||||
Sbjct: 181 ctac 184
>39805_aly-MIR159b:mirbase
Length = 202
Score = 85.7 bits (43), Expect = 1e-17
Identities = 146/176 (82%), Gaps = 7/176 (3%)
Strand = Plus / Plus
Query: 6 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 65
||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||| |||
Sbjct: 19 gctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatggatc 78
Query: 66 ccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctcagg 125
|||||| || || | || | || ||||||| || ||||| || |||||||||||
Sbjct: 79 ccataaacctta--tcaaattcaaaataaggatt---ttttatggattccatatctcagg 133
Query: 126 agctttaactt-gccctttaattgcttttactcttctttggattgaagggagctct 180
|||||| |||| ||||||||| || || |||||||||||||||||||||||||||
Sbjct: 134 agctttcacttacccctttaatggc-ttcactcttctttggattgaagggagctct 188
>40017_ath-MIR159b:mirbase
Length = 196
Score = 73.8 bits (37), Expect = 4e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 6 gctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatgaatc 65
||||||| ||||||| ||| |||||||||||| ||| ||||||||||||||||| |||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 66 ccataagcc 74
|||||||||
Sbjct: 67 ccataagcc 75
Score = 69.9 bits (35), Expect = 6e-13
Identities = 61/67 (91%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 115 catatctcaggagctttaacttgccc-tttaattgcttttactcttctttggattgaagg 173
||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 174 gagctct 180
|||||||
Sbjct: 181 gagctct 187
>40432_gma-MIR159a:mirbase
Length = 214
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 157 cttctttggattgaagggagctctaca 183
|||||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctctaca 197
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 157 cttctttggattgaagggagctctac 182
||||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 157 cttctttggattgaagggagctctac 182
||||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctctac 174
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 158 ttctttggattgaagggagctctaca 183
||||||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctctaca 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctaca 183
|||||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctctaca 182
>40397_ahy-MIR159:mirbase
Length = 197
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctaca 183
|||||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctctaca 179
>40338_rco-MIR159:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctaca 183
|||||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctctaca 177
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 ttggattgaagggagctctaca 183
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tctttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
>41218_csi-MIR159:mirbase
Length = 216
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctctac 182
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>41528_sly-MIR159:mirbase
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 109 ggcttacatatctcaggagcttta 132
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 109 ggcttacatatctcaggagcttta 132
||||| ||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 109 ggcttacatatctcaggagcttta 132
||||| ||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
