miRNEST 2.0, an integrative microRNA resource :: BLAST
>40072_ath-MIR390a:mirbase
Length = 107
Score = 131 bits (66), Expect = 1e-31
Identities = 99/108 (91%), Gaps = 4/108 (3%)
Strand = Plus / Plus
Query: 1 gtagagaagaatctgtaaagctcaggagggatagcgccatcatgatcacacac---atcg 57
|||||||||||||||||||||||||||||||||||||||| ||||||||| | |||
Sbjct: 1 gtagagaagaatctgtaaagctcaggagggatagcgccatgatgatcacattcgttatct 60
Query: 58 atatttttggcgctgtccatcctgagtttcattggctcttcttactac 105
|| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 61 at-tttttggcgctatccatcctgagtttcattggctcttcttactac 107
>39862_aly-MIR390a:mirbase
Length = 129
Score = 131 bits (66), Expect = 1e-31
Identities = 99/108 (91%), Gaps = 4/108 (3%)
Strand = Plus / Plus
Query: 1 gtagagaagaatctgtaaagctcaggagggatagcgccatcatgatcaca---cacatcg 57
|||||||||||||||||||||||||||||||||||||||| |||||| | || ||||
Sbjct: 12 gtagagaagaatctgtaaagctcaggagggatagcgccatgatgatcttatttcatatcg 71
Query: 58 atatttttggcgctgtccatcctgagtttcattggctcttcttactac 105
|| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 72 at-tttttggcgctatccatcctgagtttcattggctcttcttactac 118
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 8 agaatctgtaaagctcaggagggatagcgccatc 41
||||||||||||||||||||||||||||||||||
Sbjct: 11 agaatctgtaaagctcaggagggatagcgccatc 44
>40468_gma-MIR390a:mirbase
Length = 105
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 8 agaatctgtaaagctcaggagggatagcgccat 40
|||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgccat 33
>40467_gma-MIR390a:mirbase
Length = 105
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 8 agaatctgtaaagctcaggagggatagcgccat 40
|||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgccat 33
>41237_csi-MIR390:mirbase
Length = 154
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 5 agaagaatctgtaaagctcaggagggatagcgccat 40
|||||||||||| |||||||||||||||||||||||
Sbjct: 8 agaagaatctgttaagctcaggagggatagcgccat 43
Score = 46.1 bits (23), Expect = 5e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 65 tggcgctgtccatcctgagtttcattggctcttcttact 103
||||||| ||||||||||||||||| | ||||||||||
Sbjct: 96 tggcgctatccatcctgagtttcatggcttcttcttact 134
>40294_bna-MIR390c:mirbase
Length = 128
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 1 gtagagaagaatctgtaaagctcaggagggatagcgccat 40
||||||||| | ||||||||||||||||||||||||||||
Sbjct: 6 gtagagaagtagctgtaaagctcaggagggatagcgccat 45
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 gaagaatctgtaaagctcaggagggatagcgccat 40
||||||||||| |||||||||||||||||||||||
Sbjct: 6 gaagaatctgttaagctcaggagggatagcgccat 40
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 67 gcgctgtccatcctgagtttcattggctcttctt 100
||||| ||||||||||||||||| || |||||||
Sbjct: 94 gcgctatccatcctgagtttcatcggttcttctt 127
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 61.9 bits (31), Expect = 9e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 6 gaagaatctgtaaagctcaggagggatagcgccat 40
||||||||||| |||||||||||||||||||||||
Sbjct: 3 gaagaatctgttaagctcaggagggatagcgccat 37
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 67 gcgctgtccatcctgagtttcattggctcttctt 100
||||| ||||||||||||||||| || |||||||
Sbjct: 91 gcgctatccatcctgagtttcatcggttcttctt 124
>41640_vvi-MIR390:mirbase
Length = 140
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 agaatctgtaaagctcaggagggatagcgccat 40
||||||||| |||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccat 33
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 agaatctgtaaagctcaggagggatagcgccat 40
||||||||| |||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccat 33
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 agaatctgtaaagctcaggagggatagcgccat 40
||||||||| |||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccat 33
>40292_bna-MIR390a:mirbase
Length = 144
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 4 gagaagaatctgtaaagctcaggagggatagcgccat 40
|||||| | ||||||||||||||||||||||||||||
Sbjct: 19 gagaagtagctgtaaagctcaggagggatagcgccat 55
>40469_gma-MIR390b:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 8 agaatctgtaaagctcaggagggatagc 35
||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 8 agaatctgtaaagctcaggagggatagcgcc 38
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 8 agaatctgtaaagctcaggagggatagcgcc 38
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 65 tggcgctgtccatcctgagtttcattg 91
||||||| |||||||||||||||||||
Sbjct: 77 tggcgctatccatcctgagtttcattg 103
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 11 atctgtaaagctcaggagggatagcgccat 40
|||||| |||||||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgccat 33
>40073_ath-MIR390b:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 taaagctcaggagggatagcgccat 40
|||||||||||||||||||||||||
Sbjct: 13 taaagctcaggagggatagcgccat 37
>39863_aly-MIR390b:mirbase
Length = 127
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 16 taaagctcaggagggatagcgccat 40
|||||||||||||||||||||||||
Sbjct: 17 taaagctcaggagggatagcgccat 41
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 ctgtaaagctcaggagggatagcgccat 40
|||| |||||||||||||||||||||||
Sbjct: 16 ctgttaagctcaggagggatagcgccat 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 67 gcgctgtccatcctgagtttcattggctcttctt 100
||||| ||||||||||||||||| || |||||||
Sbjct: 88 gcgctatccatcctgagtttcatcggttcttctt 121
>40705_mtr-MIR390:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 13 ctgtaaagctcaggagggatagcgccat 40
|||| |||||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgccat 28
>40372_rco-MIR390b:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 aagctcaggagggatagcgccat 40
|||||||||||||||||||||||
Sbjct: 6 aagctcaggagggatagcgccat 28
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 67 gcgctgtccatcctgagtttcattgg 92
||||| ||||||||||||||||||||
Sbjct: 96 gcgctatccatcctgagtttcattgg 121
>39485_ppt-MIR390a:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 aagctcaggagggatagcgccat 40
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>40371_rco-MIR390a:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 ctgtaaagctcaggagggatagcgcc 38
|||| |||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgcc 26
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 65 tggcgctgtccatcctgagtttca 88
||||||| ||||||||||||||||
Sbjct: 80 tggcgctatccatcctgagtttca 103
>42785_zma-MIR390b:mirbase
Length = 192
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 aagctcaggagggatagcgcc 38
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42784_zma-MIR390a:mirbase
Length = 181
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 aagctcaggagggatagcgcc 38
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42565_sbi-MIR390:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 aagctcaggagggatagcgcc 38
|||||||||||||||||||||
Sbjct: 3 aagctcaggagggatagcgcc 23
>41996_osa-MIR390:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 aagctcaggagggatagcgcc 38
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41773_bdi-MIR390b:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 aagctcaggagggatagcgcc 38
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41772_bdi-MIR390:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 aagctcaggagggatagcgcc 38
|||||||||||||||||||||
Sbjct: 31 aagctcaggagggatagcgcc 51
>39486_ppt-MIR390b:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 aagctcaggagggatagcgcc 38
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>39487_ppt-MIR390c:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 agctcaggagggatagcgcc 38
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
