miRNEST 2.0, an integrative microRNA resource :: BLAST
>40076_ath-MIR393b:mirbase
Length = 160
Score = 81.8 bits (41), Expect = 1e-16
Identities = 71/80 (88%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcctaatcaagctgagttattcccgaataattattttaatt 60
|||||||||||||||||||||||||| ||||||| |||||||| ||||||| |||| ||
Sbjct: 11 tccaaagggatcgcattgatcctaattaagctgatttattccccaataattgtttttttt 70
Query: 61 tt--ttctcaatggaaagat 78
|| |||||||| |||||||
Sbjct: 71 ttccttctcaatcgaaagat 90
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 91 ttttgcttcgttttccggatcatgcgatctctt 123
|||||||| |||||||||||||||||||||||
Sbjct: 114 ttttgcttacttttccggatcatgcgatctctt 146
>39866_aly-MIR393b:mirbase
Length = 169
Score = 71.9 bits (36), Expect = 1e-13
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcctaatcaagctgagttattcccgaata 48
|||||||||||||||||||||||||| ||||||| |||||||| ||||
Sbjct: 18 tccaaagggatcgcattgatcctaattaagctgatttattccccaata 65
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 92 tttgcttcgttttccggatcatgcgatctctt 123
||||||| |||||||||||||||||||||||
Sbjct: 117 tttgctttcttttccggatcatgcgatctctt 148
>40075_ath-MIR393a:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcctaat 26
||||||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcctaat 36
>39865_aly-MIR393a:mirbase
Length = 147
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcctaat 26
||||||||||||||||||||||||||
Sbjct: 18 tccaaagggatcgcattgatcctaat 43
>41238_csi-MIR393:mirbase
Length = 145
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcctaa 25
|||||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcctaa 45
>40706_mtr-MIR393:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatccta 24
||||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatccta 44
>41997_osa-MIR393:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcct 23
|||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcct 33
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcct 23
|||||||||||||||||||||||
Sbjct: 36 tccaaagggatcgcattgatcct 58
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcct 23
|||||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatcct 43
>42787_zma-MIR393b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcc 22
||||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatcc 23
>42566_sbi-MIR393:mirbase
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcc 22
||||||||||||||||||||||
Sbjct: 20 tccaaagggatcgcattgatcc 41
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcc 22
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcc 22
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcc 22
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcc 22
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>40707_mtr-MIR393b:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcc 22
||||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatcc 27
>40470_gma-MIR393:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatcc 22
||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatcc 32
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41999_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tccaaagggatcgcattgatc 21
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
