miRNEST 2.0, an integrative microRNA resource :: BLAST
>41220_csi-MIR162:mirbase
Length = 201
Score = 97.6 bits (49), Expect = 1e-21
Identities = 90/101 (89%), Gaps = 2/101 (1%)
Strand = Plus / Plus
Query: 1 tcactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaa-at 59
|||||||||||||||||||||||||| ||| || || |||||||||||||| | || |
Sbjct: 86 tcactggaggcagcggttcatcgatcactttgtgcaa-attttgttgtgaaaaataacac 144
Query: 60 aaaacgcatgaatcgatcgataaacctctgcatccagcgct 100
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 145 aaaatacatgaatcgatcgataaacctctgcatccagcgct 185
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 91.7 bits (46), Expect = 9e-20
Identities = 87/98 (88%), Gaps = 2/98 (2%)
Strand = Plus / Plus
Query: 2 cactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaataa 61
||||||||||||||||||||||||||||||||| | |||||||||||| | || | ||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctgaga-attttgttgtgagaataacacaa 80
Query: 62 aacgcatgaatcgatcgataaacctctgcatccagcgc 99
| ||||||||||||||||||||||||||||||||||
Sbjct: 81 ata-catgaatcgatcgataaacctctgcatccagcgc 117
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 87.7 bits (44), Expect = 1e-18
Identities = 87/98 (88%), Gaps = 5/98 (5%)
Strand = Plus / Plus
Query: 1 tcactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaata 60
||||||||||||||||||||||||||||||||||| || |||| ||||||| || | |
Sbjct: 10 tcactggaggcagcggttcatcgatctcttcctgg--gaatttggtgtgaaa-aatcaca 66
Query: 61 aaacgcatgaatcgatcgataaacctctgcatccagcg 98
|| |||||||||||||||||||||||||||||||||
Sbjct: 67 gaa--catgaatcgatcgataaacctctgcatccagcg 102
>41090_tcc-MIR162:mirbase
Length = 131
Score = 85.7 bits (43), Expect = 6e-18
Identities = 84/95 (88%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 2 cactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaataa 61
|||||||||||||||||||||||||||||||||| | |||||||||||| | | || |
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctggga-attttgttgtgaga-ataacaca 76
Query: 62 aacgcatgaatcgatcgataaacctctgcatccag 96
|| ||||| |||||||||||||||||||||||||
Sbjct: 77 aatacatgattcgatcgataaacctctgcatccag 111
>39813_aly-MIR162b:mirbase
Length = 184
Score = 73.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 65 gcatgaatcgatcgataaacctctgcatccagcgctt 101
|||||||||||||||||||||||||||||||||||||
Sbjct: 102 gcatgaatcgatcgataaacctctgcatccagcgctt 138
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 69.9 bits (35), Expect = 3e-13
Identities = 85/100 (85%), Gaps = 5/100 (5%)
Strand = Plus / Plus
Query: 2 cactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaataa 61
|||||||||||||||||||||||||||||||||| ||||| |||| | || || ||
Sbjct: 9 cactggaggcagcggttcatcgatctcttcctggccaatttt-ttgtttagcacgaaaaa 67
Query: 62 aacgcatgaatcgatcgataaacctctgcatccagcgctt 101
|||||| |||||||||||||||||||||||||||||
Sbjct: 68 ----catgaaccgatcgataaacctctgcatccagcgctt 103
>40437_gma-MIR162:mirbase
Length = 102
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 66 catgaatcgatcgataaacctctgcatccagcgct 100
|||||||||||||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccagcgct 97
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 tcactggaggcagcggttcatcgatctcttcctg 34
|||||||| |||||||||||||||||||||||||
Sbjct: 7 tcactggatgcagcggttcatcgatctcttcctg 40
>40025_ath-MIR162b:mirbase
Length = 111
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 69 gaatcgatcgataaacctctgcatccagcgct 100
||||||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 4 ctggaggcagcggttcatcgatc 26
|||||||||||||||||||||||
Sbjct: 12 ctggaggcagcggttcatcgatc 34
>39812_aly-MIR162a:mirbase
Length = 228
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 4 ctggaggcagcggttcatcgatctcttcctgg 35
||||||||||||||||||||||||||||||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcctgg 99
Score = 61.9 bits (31), Expect = 8e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 60 aaaacgcatgaatcgatcgataaacctctgcatccagcg 98
|||| |||||||| |||||||||||||||||||||||||
Sbjct: 120 aaaaagcatgaatagatcgataaacctctgcatccagcg 158
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 8e-11
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 2 cactggaggcagcggttcatcgatctcttcctggaagattttgttgt 48
|||||||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 9 cactggaggcagcggttcatcgatcttttcct-gaagatttttttgt 54
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 8e-11
Identities = 44/47 (93%), Gaps = 1/47 (2%)
Strand = Plus / Plus
Query: 2 cactggaggcagcggttcatcgatctcttcctggaagattttgttgt 48
|||||||||||||||||||||||||| ||||| ||||||||| ||||
Sbjct: 9 cactggaggcagcggttcatcgatcttttcct-gaagatttttttgt 54
>40663_mtr-MIR162:mirbase
Length = 124
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 66 catgaatcgatcgataaacctctgcatccagcgct 100
||||||||| |||||||||||||||||||||||||
Sbjct: 77 catgaatcggtcgataaacctctgcatccagcgct 111
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 1 tcactggaggcagcggttcatcgatctcttcctg 34
|||||||| |||||||||||||||||| ||||||
Sbjct: 18 tcactggatgcagcggttcatcgatctgttcctg 51
>40024_ath-MIR162a:mirbase
Length = 140
Score = 61.9 bits (31), Expect = 8e-11
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 4 ctggaggcagcggttcatcgatctcttcctg 34
|||||||||||||||||||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctg 55
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 65 gcatgaatcgatcgataaacctctgcatccagcg 98
|||||||| |||||||||||||||||||||||||
Sbjct: 78 gcatgaatagatcgataaacctctgcatccagcg 111
>41578_vvi-MIR162:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 tcactggaggcagcggttcatcgatctcttcctg 34
|||||||| |||||||||||||||||||||||||
Sbjct: 6 tcactggatgcagcggttcatcgatctcttcctg 39
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 69 gaatcgatcgataaacctctgcatccag 96
||||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 69 gaatcgatcgataaacctctgcatccag 96
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41930_osa-MIR162b:mirbase
Length = 134
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 aacgcatgaatcgatcgataaacctctgcatccag 96
|||||| |||||||||||||| |||||||||||||
Sbjct: 90 aacgcaggaatcgatcgataagcctctgcatccag 124
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 69 gaatcgatcgataaacctctgcatcc 94
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 gaatcgatcgataaacctctgcatccag 96
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 69 gaatcgatcgataaacctctgcatccag 96
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
