miRNEST 2.0, an integrative microRNA resource :: BLAST
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 71.9 bits (36), Expect = 1e-13
Identities = 49/52 (94%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 93 ttcaatccaatagtccctttgatatgggaatcttgatgatgctgcagcggca 144
||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 89 ttcaatccaatag-ccctttgaattgggaatcttgatgatgctgcagcggca 139
Score = 61.9 bits (31), Expect = 1e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 4 atggagcatcatcaagattcacaaactttatctagggctagtg 46
|||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 11 atggagcatcatcaagattcacaagctttat-tagggctagtg 52
>40461_gma-MIR172d:mirbase
Length = 150
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 107 ccctttgatatgggaatcttgatgatgctgcagc 140
||||||||||||||||||||||||||||||||||
Sbjct: 99 ccctttgatatgggaatcttgatgatgctgcagc 132
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 gatggagcatcatcaagattcacaa 27
|||||||||||||||||||||||||
Sbjct: 20 gatggagcatcatcaagattcacaa 44
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 109 ctttgatatgggaatcttgatgatgctgcagcggca 144
||||||| ||||||||||||||||||||||||||||
Sbjct: 98 ctttgatgtgggaatcttgatgatgctgcagcggca 133
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 gatggagcatcatcaagattcacaa 27
|||||||||||||||||||||||||
Sbjct: 8 gatggagcatcatcaagattcacaa 32
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 115 tatgggaatcttgatgatgctgcagcggca 144
||||||||||||||||||||||||||||||
Sbjct: 111 tatgggaatcttgatgatgctgcagcggca 140
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 ctgatggagcatcatcaagattcacaaa 28
||||||||||||||||||||||||||||
Sbjct: 15 ctgatggagcatcatcaagattcacaaa 42
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 58.0 bits (29), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Strand = Plus / Plus
Query: 3 gatggagcatcatcaagattcacaaactttatctagggcta 43
||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 10 gatggagcaccatcaagattcacaaactttat-tagggcta 49
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 117 tgggaatcttgatgatgctgcagcggca 144
||||||||||||||||||||||||||||
Sbjct: 112 tgggaatcttgatgatgctgcagcggca 139
>40462_gma-MIR172e:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 110 tttgatatgggaatcttgatgatgctgcagc 140
|||| ||||||||||||||||||||||||||
Sbjct: 105 tttgctatgggaatcttgatgatgctgcagc 135
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 tggagcatcatcaagattcacaaacttta 33
||||||||||||||||||||||| |||||
Sbjct: 22 tggagcatcatcaagattcacaagcttta 50
>40460_gma-MIR172c:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 110 tttgatatgggaatcttgatgatgctgcagc 140
|||| ||||||||||||||||||||||||||
Sbjct: 105 tttgctatgggaatcttgatgatgctgcagc 135
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 tggagcatcatcaagattcacaaacttta 33
||||||||||||||||||||||| |||||
Sbjct: 22 tggagcatcatcaagattcacaagcttta 50
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 115 tatgggaatcttgatgatgctgcagcggca 144
|||||||||||||||||||||||| |||||
Sbjct: 149 tatgggaatcttgatgatgctgcatcggca 178
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 9 gcatcatcaagattcacaaacttta 33
||||||||||||||||||| |||||
Sbjct: 16 gcatcatcaagattcacaagcttta 40
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 116 atgggaatcttgatgatgctgcagcggca 144
||||||||||||||||||||||| |||||
Sbjct: 101 atgggaatcttgatgatgctgcatcggca 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 13 catcaagattcacaaacttta 33
|||||||||||||||||||||
Sbjct: 20 catcaagattcacaaacttta 40
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 gcatcatcaagattcacaaacttta 33
|||||||||||||||||||||||||
Sbjct: 26 gcatcatcaagattcacaaacttta 50
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 116 atgggaatcttgatgatgctgca 138
|||||||||||||||||||||||
Sbjct: 120 atgggaatcttgatgatgctgca 142
>40066_ath-MIR172d:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 gaatcttgatgatgctgcagcggca 144
|||||||||||||||||||||||||
Sbjct: 89 gaatcttgatgatgctgcagcggca 113
>39855_aly-MIR172d:mirbase
Length = 163
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 120 gaatcttgatgatgctgcagcggca 144
|||||||||||||||||||||||||
Sbjct: 113 gaatcttgatgatgctgcagcggca 137
>40065_ath-MIR172c:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 tggagcatcatcaagattcacaaa 28
||||||||||||||||||||||||
Sbjct: 17 tggagcatcatcaagattcacaaa 40
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 tatgggaatcttgatgatgctgcagc 140
|||| |||||||||||||||||||||
Sbjct: 94 tatgagaatcttgatgatgctgcagc 119
>39854_aly-MIR172c:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 tggagcatcatcaagattcacaaa 28
||||||||||||||||||||||||
Sbjct: 17 tggagcatcatcaagattcacaaa 40
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 115 tatgggaatcttgatgatgctgcagc 140
|||| |||||||||||||||||||||
Sbjct: 94 tatgagaatcttgatgatgctgcagc 119
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 116 atgggaatcttgatgatgctgca 138
|||||||||||||||||||||||
Sbjct: 83 atgggaatcttgatgatgctgca 105
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 112 tgatatgggaatcttgatgatgctgca 138
||||||| |||||||||||||||||||
Sbjct: 91 tgatatgagaatcttgatgatgctgca 117
>41050_ghr-MIR172:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 tggagcatcatcaagattcacaa 27
|||||||||||||||||||||||
Sbjct: 17 tggagcatcatcaagattcacaa 39
>42779_zma-MIR172e:mirbase
Length = 174
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 tgggaatcttgatgatgctgca 138
||||||||||||||||||||||
Sbjct: 133 tgggaatcttgatgatgctgca 154
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 tgggaatcttgatgatgctgca 138
||||||||||||||||||||||
Sbjct: 148 tgggaatcttgatgatgctgca 169
>41991_osa-MIR172b:mirbase
Length = 238
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 tgggaatcttgatgatgctgca 138
||||||||||||||||||||||
Sbjct: 206 tgggaatcttgatgatgctgca 227
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 tgggaatcttgatgatgctgca 138
||||||||||||||||||||||
Sbjct: 202 tgggaatcttgatgatgctgca 223
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ctgatggagcatcatcaagattcaca 26
|||||| |||||||||||||||||||
Sbjct: 6 ctgatgcagcatcatcaagattcaca 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 110 tttgatatgggaatcttgatgatgctgca 138
||||| ||| |||||||||||||||||||
Sbjct: 70 tttgagatgagaatcttgatgatgctgca 98
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 tggagcatcatcaagattcaca 26
||||||||||||||||||||||
Sbjct: 12 tggagcatcatcaagattcaca 33
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 120 gaatcttgatgatgctgcagcggca 144
||||||||||||||||||| |||||
Sbjct: 112 gaatcttgatgatgctgcatcggca 136
>41235_csi-MIR172c:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 5 tggagcatcatcaagattcacaaact 30
||||||| ||||||||||||||||||
Sbjct: 13 tggagcaccatcaagattcacaaact 38
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 ggaatcttgatgatgctgcagc 140
||||||||||||||||||||||
Sbjct: 120 ggaatcttgatgatgctgcagc 141
>40067_ath-MIR172e:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 tgggaatcttgatgatgctgca 138
||||||||||||||||||||||
Sbjct: 93 tgggaatcttgatgatgctgca 114
>39856_aly-MIR172e:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 117 tgggaatcttgatgatgctgca 138
||||||||||||||||||||||
Sbjct: 96 tgggaatcttgatgatgctgca 117
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 120 gaatcttgatgatgctgcagcggca 144
||||||||||||||||||| |||||
Sbjct: 100 gaatcttgatgatgctgcatcggca 124
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 120 gaatcttgatgatgctgcagcggca 144
||||||||||||||||||| |||||
Sbjct: 28 gaatcttgatgatgctgcatcggca 4
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 120 gaatcttgatgatgctgcagcggca 144
||||||||||||||||||| |||||
Sbjct: 28 gaatcttgatgatgctgcatcggca 4
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 120 gaatcttgatgatgctgcagcggca 144
||||||||||||||||||| |||||
Sbjct: 133 gaatcttgatgatgctgcatcggca 157
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 120 gaatcttgatgatgctgcagcggca 144
||||||||||||||||||| |||||
Sbjct: 150 gaatcttgatgatgctgcatcggca 174
>40459_gma-MIR172b:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 110 tttgatatgggaatcttgatgatgctgca 138
|||||| || |||||||||||||||||||
Sbjct: 105 tttgatgtgagaatcttgatgatgctgca 133
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 gatggagcatcatcaagattcaca 26
|||| |||||||||||||||||||
Sbjct: 20 gatgtagcatcatcaagattcaca 43
>40324_bra-MIR172b:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 atatgggaatcttgatgatgctgca 138
||||| |||||||||||||||||||
Sbjct: 77 atatgagaatcttgatgatgctgca 101
>40323_bra-MIR172a:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 atatgggaatcttgatgatgctgca 138
||||| |||||||||||||||||||
Sbjct: 82 atatgagaatcttgatgatgctgca 106
>40307_bol-MIR172b:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 atatgggaatcttgatgatgctgca 138
||||| |||||||||||||||||||
Sbjct: 77 atatgagaatcttgatgatgctgca 101
>40306_bol-MIR172a:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 atatgggaatcttgatgatgctgca 138
||||| |||||||||||||||||||
Sbjct: 82 atatgagaatcttgatgatgctgca 106
>40064_ath-MIR172b:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 atatgggaatcttgatgatgctgca 138
||||| |||||||||||||||||||
Sbjct: 66 atatgagaatcttgatgatgctgca 90
>39853_aly-MIR172b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 114 atatgggaatcttgatgatgctgca 138
||||| |||||||||||||||||||
Sbjct: 88 atatgagaatcttgatgatgctgca 112
>39852_aly-MIR172a:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 120 gaatcttgatgatgctgcagcggca 144
||||||||||||||||||| |||||
Sbjct: 100 gaatcttgatgatgctgcatcggca 124
>41233_csi-MIR172a:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 120 gaatcttgatgatgctgcagcggc 143
||||||||||||||||||| ||||
Sbjct: 116 gaatcttgatgatgctgcaacggc 139
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 120 gaatcttgatgatgctgcagcggc 143
||||||||||||||||||| ||||
Sbjct: 121 gaatcttgatgatgctgcatcggc 144
>40463_gma-MIR172f:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 gatggagcatcatcaagattcaca 26
|||| |||||||||||||||||||
Sbjct: 4 gatgtagcatcatcaagattcaca 27
>40458_gma-MIR172a:mirbase
Length = 159
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 3 gatggagcatcatcaagattcaca 26
|||| |||||||||||||||||||
Sbjct: 20 gatgtagcatcatcaagattcaca 43
>40063_ath-MIR172a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 120 gaatcttgatgatgctgcagcggc 143
||||||||||||||||||| ||||
Sbjct: 79 gaatcttgatgatgctgcatcggc 102
