miRNEST 2.0, an integrative microRNA resource :: BLAST
>41411_ptc-MIR319h:mirbase
Length = 195
Score = 79.8 bits (40), Expect = 7e-16
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 9 gctcctttcagtccaatatggagggcttagaagcggcaaagagctgccatctcatgcatt 68
|||||||| ||||||||| |||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 17 gctccttttagtccaataaggagggctgagaagcggcta-gagctgccatctcatgcatt 75
Query: 69 aaggcaat 76
|||||||
Sbjct: 76 taggcaat 83
>41408_ptc-MIR319e:mirbase
Length = 192
Score = 79.8 bits (40), Expect = 7e-16
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 9 gctcctttcagtccaatatggagggcttagaagcggcaaagagctgccatctcatgcatt 68
|||||||| ||||||||| |||||||| ||||||||| | ||||||||||||||||||||
Sbjct: 15 gctccttttagtccaatacggagggctgagaagcggcta-gagctgccatctcatgcatt 73
Query: 69 aaggcaat 76
|||||||
Sbjct: 74 taggcaat 81
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctccttctttc 187
||||||||||||||||||||||||||
Sbjct: 410 ttggactgaagggagctccttctttc 435
>40071_ath-MIR319c:mirbase
Length = 199
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctccttcttt 186
|||||||||||||||||||||||||
Sbjct: 170 ttggactgaagggagctccttcttt 194
>39861_aly-MIR319d:mirbase
Length = 267
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctccttcttt 186
|||||||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctccttcttt 228
>39860_aly-MIR319c:mirbase
Length = 271
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctccttcttt 186
|||||||||||||||||||||||||
Sbjct: 204 ttggactgaagggagctccttcttt 228
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 2e-06
Identities = 52/60 (86%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 7 gagctcctttcagtccaatatggagggcttagaagcggcaaagagctgccatctcatgca 66
|||||||||| ||||||||| ||||||| || ||||| | ||||||||||||||||||
Sbjct: 12 gagctccttttagtccaataaagagggctgaggggcggcca-gagctgccatctcatgca 70
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 154 cccacccattggactgaagggagctcc 180
||||| |||||||||||||||||||||
Sbjct: 184 cccactcattggactgaagggagctcc 210
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctccttc 183
||||||||||||||||||||||
Sbjct: 176 ttggactgaagggagctccttc 197
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctccttc 183
||||||||||||||||||||||
Sbjct: 174 ttggactgaagggagctccttc 195
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 cattggactgaagggagctcc 180
|||||||||||||||||||||
Sbjct: 155 cattggactgaagggagctcc 175
>40466_gma-MIR319c:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctccttcttt 186
|||||||||| ||||||||||||||
Sbjct: 183 ttggactgaaaggagctccttcttt 207
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 4 aaggagctcctttcagtccaa 24
|||||||||||||||||||||
Sbjct: 203 aaggagctcctttcagtccaa 183
>41637_vvi-MIR319e:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctcct 181
||||||||||||||||||||
Sbjct: 77 ttggactgaagggagctcct 96
>41236_csi-MIR319:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctcct 181
||||||||||||||||||||
Sbjct: 91 ttggactgaagggagctcct 110
>41129_tcc-MIR319:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctcct 181
||||||||||||||||||||
Sbjct: 94 ttggactgaagggagctcct 113
>40069_ath-MIR319a:mirbase
Length = 176
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 attggactgaagggagctcc 180
||||||||||||||||||||
Sbjct: 153 attggactgaagggagctcc 172
>39858_aly-MIR319a:mirbase
Length = 221
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 161 attggactgaagggagctcc 180
||||||||||||||||||||
Sbjct: 176 attggactgaagggagctcc 195
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 162 ttggactgaagggagctcct 181
||||||||||||||||||||
Sbjct: 141 ttggactgaagggagctcct 160
