miRNEST 2.0, an integrative microRNA resource :: BLAST
>41640_vvi-MIR390:mirbase
Length = 140
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 6 ctgttaagctcaggagggatagcgcc 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 79 gtggcgctatccatcctgagtttcac 104
||||||||||| ||||||||||||||
Sbjct: 106 gtggcgctatctatcctgagtttcac 131
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 6 ctgttaagctcaggagggatagcgcc 31
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 78 agtggcgctatccatcctgagttt 101
||||||||||||||||||||||||
Sbjct: 75 agtggcgctatccatcctgagttt 98
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 6 ctgttaagctcaggagggatagcgcc 31
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 70 tagtctttagtggcgctatccatcctgagtt 100
||||| |||||||||||||| ||||||||||
Sbjct: 84 tagtcattagtggcgctatctatcctgagtt 114
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 6 ctgttaagctcaggagggatagcgcc 31
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 78 agtggcgctatccatcctgagtttca 103
||||||||||||||||||||||||||
Sbjct: 75 agtggcgctatccatcctgagtttca 100
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 6 ctgttaagctcaggagggatagcgcc 31
>41237_csi-MIR390:mirbase
Length = 154
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 16 ctgttaagctcaggagggatagcgcc 41
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 tggcgctatccatcctgagtttca 103
||||||||||||||||||||||||
Sbjct: 96 tggcgctatccatcctgagtttca 119
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 16 ctgttaagctcaggagggatagcgcc 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 gcgctatccatcctgagtttca 103
||||||||||||||||||||||
Sbjct: 88 gcgctatccatcctgagtttca 109
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 6 ctgttaagctcaggagggatagcgcc 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 gcgctatccatcctgagtttca 103
||||||||||||||||||||||
Sbjct: 87 gcgctatccatcctgagtttca 108
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 13 ctgttaagctcaggagggatagcgcc 38
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 gcgctatccatcctgagtttca 103
||||||||||||||||||||||
Sbjct: 94 gcgctatccatcctgagtttca 115
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 10 ctgttaagctcaggagggatagcgcc 35
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 gcgctatccatcctgagtttca 103
||||||||||||||||||||||
Sbjct: 91 gcgctatccatcctgagtttca 112
>40705_mtr-MIR390:mirbase
Length = 100
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
||||||||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgcc 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 gcgctatccatcctgagtttca 103
||||||||||||||||||||||
Sbjct: 76 gcgctatccatcctgagtttca 97
>40072_ath-MIR390a:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 1e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgccgtgaagatca 36
|||| ||||||||||||||||||||| ||| |||||
Sbjct: 13 ctgtaaagctcaggagggatagcgccatgatgatca 48
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 tggcgctatccatcctgagtttca 103
||||||||||||||||||||||||
Sbjct: 67 tggcgctatccatcctgagtttca 90
>39862_aly-MIR390a:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 80 tggcgctatccatcctgagtttca 103
||||||||||||||||||||||||
Sbjct: 78 tggcgctatccatcctgagtttca 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgccgtgaagatc 35
|||| ||||||||||||||||||||| ||| ||||
Sbjct: 24 ctgtaaagctcaggagggatagcgccatgatgatc 58
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
|||| |||||||||||||||||||||
Sbjct: 16 ctgtaaagctcaggagggatagcgcc 41
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 tggcgctatccatcctgagtttca 103
|||||||||| |||||||||||||
Sbjct: 77 tggcgctatctatcctgagtttca 100
>40469_gma-MIR390b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgccgtga 30
|||| |||||||||||||||||| ||||||
Sbjct: 6 ctgtaaagctcaggagggatagcaccgtga 35
>40468_gma-MIR390a:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
|||| |||||||||||||||||||||
Sbjct: 6 ctgtaaagctcaggagggatagcgcc 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 gcgctatccatcctgagtttca 103
||||||||||||||||||||||
Sbjct: 67 gcgctatccatcctgagtttca 88
>40467_gma-MIR390a:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
|||| |||||||||||||||||||||
Sbjct: 6 ctgtaaagctcaggagggatagcgcc 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 gcgctatccatcctgagtttca 103
||||||||||||||||||||||
Sbjct: 67 gcgctatccatcctgagtttca 88
>40372_rco-MIR390b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgcc 26
||||||||||||||||||||||
Sbjct: 5 taagctcaggagggatagcgcc 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 82 gcgctatccatcctgagtttca 103
||||||||||||||||||||||
Sbjct: 96 gcgctatccatcctgagtttca 117
>40294_bna-MIR390c:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
|||| |||||||||||||||||||||
Sbjct: 18 ctgtaaagctcaggagggatagcgcc 43
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 tggcgctatccatcctgagtt 100
|||||||||||||||||||||
Sbjct: 83 tggcgctatccatcctgagtt 103
>40293_bna-MIR390b:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
|||| |||||||||||||||||||||
Sbjct: 13 ctgtaaagctcaggagggatagcgcc 38
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 tggcgctatccatcctgagtttca 103
||||||| ||||||||||||||||
Sbjct: 65 tggcgctgtccatcctgagtttca 88
>40292_bna-MIR390a:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 ctgttaagctcaggagggatagcgcc 26
|||| |||||||||||||||||||||
Sbjct: 28 ctgtaaagctcaggagggatagcgcc 53
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 tggcgctatccatcctgagtt 100
|||||||||||||||||||||
Sbjct: 93 tggcgctatccatcctgagtt 113
>39863_aly-MIR390b:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccgtgaa 31
||||||||||||||||||||| ||||
Sbjct: 19 aagctcaggagggatagcgccatgaa 44
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 tggcgctatccatcctgagtt 100
|||||||||||||||||||||
Sbjct: 89 tggcgctatccatcctgagtt 109
>42785_zma-MIR390b:mirbase
Length = 192
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42784_zma-MIR390a:mirbase
Length = 181
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42565_sbi-MIR390:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 3 aagctcaggagggatagcgcc 23
>41996_osa-MIR390:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41773_bdi-MIR390b:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41772_bdi-MIR390:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 31 aagctcaggagggatagcgcc 51
>40073_ath-MIR390b:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 15 aagctcaggagggatagcgcc 35
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 80 tggcgctatccatcctgagtt 100
|||||||||||||||||||||
Sbjct: 85 tggcgctatccatcctgagtt 105
>39486_ppt-MIR390b:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>39485_ppt-MIR390a:mirbase
Length = 137
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgcc 36
>39487_ppt-MIR390c:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agctcaggagggatagcgcc 26
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
